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Impact of Deuteration and Temperature on Furan Ring Dynamics
Despite significant progress in conformational analysis of cyclic molecules, the number of computational studies is still limited while most of that available in the literature data have been obtained long time ago with outdated methods. In present research, we have studied temperature driven confor...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8152745/ https://www.ncbi.nlm.nih.gov/pubmed/34068118 http://dx.doi.org/10.3390/molecules26102889 |
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author | Dopieralski, Przemyslaw Omelchenko, Iryna V. Latajka, Zdzislaw |
author_facet | Dopieralski, Przemyslaw Omelchenko, Iryna V. Latajka, Zdzislaw |
author_sort | Dopieralski, Przemyslaw |
collection | PubMed |
description | Despite significant progress in conformational analysis of cyclic molecules, the number of computational studies is still limited while most of that available in the literature data have been obtained long time ago with outdated methods. In present research, we have studied temperature driven conformational changes of the furan ring at three different temperatures. Additionally, the effect of deuteration on the ring dynamics is discussed; in addition, the aromaticity indices following the Bird and HOMA schemes are computed along all trajectories. Our ab initio molecular dynamic simulations revealed that deuteration has changed the furan ring dynamics and the obvious consequences; in addition, the shape and size of molecule are expected to be different. |
format | Online Article Text |
id | pubmed-8152745 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-81527452021-05-27 Impact of Deuteration and Temperature on Furan Ring Dynamics Dopieralski, Przemyslaw Omelchenko, Iryna V. Latajka, Zdzislaw Molecules Article Despite significant progress in conformational analysis of cyclic molecules, the number of computational studies is still limited while most of that available in the literature data have been obtained long time ago with outdated methods. In present research, we have studied temperature driven conformational changes of the furan ring at three different temperatures. Additionally, the effect of deuteration on the ring dynamics is discussed; in addition, the aromaticity indices following the Bird and HOMA schemes are computed along all trajectories. Our ab initio molecular dynamic simulations revealed that deuteration has changed the furan ring dynamics and the obvious consequences; in addition, the shape and size of molecule are expected to be different. MDPI 2021-05-13 /pmc/articles/PMC8152745/ /pubmed/34068118 http://dx.doi.org/10.3390/molecules26102889 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Dopieralski, Przemyslaw Omelchenko, Iryna V. Latajka, Zdzislaw Impact of Deuteration and Temperature on Furan Ring Dynamics |
title | Impact of Deuteration and Temperature on Furan Ring Dynamics |
title_full | Impact of Deuteration and Temperature on Furan Ring Dynamics |
title_fullStr | Impact of Deuteration and Temperature on Furan Ring Dynamics |
title_full_unstemmed | Impact of Deuteration and Temperature on Furan Ring Dynamics |
title_short | Impact of Deuteration and Temperature on Furan Ring Dynamics |
title_sort | impact of deuteration and temperature on furan ring dynamics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8152745/ https://www.ncbi.nlm.nih.gov/pubmed/34068118 http://dx.doi.org/10.3390/molecules26102889 |
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