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Impact of Deuteration and Temperature on Furan Ring Dynamics

Despite significant progress in conformational analysis of cyclic molecules, the number of computational studies is still limited while most of that available in the literature data have been obtained long time ago with outdated methods. In present research, we have studied temperature driven confor...

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Autores principales: Dopieralski, Przemyslaw, Omelchenko, Iryna V., Latajka, Zdzislaw
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8152745/
https://www.ncbi.nlm.nih.gov/pubmed/34068118
http://dx.doi.org/10.3390/molecules26102889
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author Dopieralski, Przemyslaw
Omelchenko, Iryna V.
Latajka, Zdzislaw
author_facet Dopieralski, Przemyslaw
Omelchenko, Iryna V.
Latajka, Zdzislaw
author_sort Dopieralski, Przemyslaw
collection PubMed
description Despite significant progress in conformational analysis of cyclic molecules, the number of computational studies is still limited while most of that available in the literature data have been obtained long time ago with outdated methods. In present research, we have studied temperature driven conformational changes of the furan ring at three different temperatures. Additionally, the effect of deuteration on the ring dynamics is discussed; in addition, the aromaticity indices following the Bird and HOMA schemes are computed along all trajectories. Our ab initio molecular dynamic simulations revealed that deuteration has changed the furan ring dynamics and the obvious consequences; in addition, the shape and size of molecule are expected to be different.
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spelling pubmed-81527452021-05-27 Impact of Deuteration and Temperature on Furan Ring Dynamics Dopieralski, Przemyslaw Omelchenko, Iryna V. Latajka, Zdzislaw Molecules Article Despite significant progress in conformational analysis of cyclic molecules, the number of computational studies is still limited while most of that available in the literature data have been obtained long time ago with outdated methods. In present research, we have studied temperature driven conformational changes of the furan ring at three different temperatures. Additionally, the effect of deuteration on the ring dynamics is discussed; in addition, the aromaticity indices following the Bird and HOMA schemes are computed along all trajectories. Our ab initio molecular dynamic simulations revealed that deuteration has changed the furan ring dynamics and the obvious consequences; in addition, the shape and size of molecule are expected to be different. MDPI 2021-05-13 /pmc/articles/PMC8152745/ /pubmed/34068118 http://dx.doi.org/10.3390/molecules26102889 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dopieralski, Przemyslaw
Omelchenko, Iryna V.
Latajka, Zdzislaw
Impact of Deuteration and Temperature on Furan Ring Dynamics
title Impact of Deuteration and Temperature on Furan Ring Dynamics
title_full Impact of Deuteration and Temperature on Furan Ring Dynamics
title_fullStr Impact of Deuteration and Temperature on Furan Ring Dynamics
title_full_unstemmed Impact of Deuteration and Temperature on Furan Ring Dynamics
title_short Impact of Deuteration and Temperature on Furan Ring Dynamics
title_sort impact of deuteration and temperature on furan ring dynamics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8152745/
https://www.ncbi.nlm.nih.gov/pubmed/34068118
http://dx.doi.org/10.3390/molecules26102889
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