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NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis

During pandemics (e.g., COVID-19) physicians have to focus on diagnosing and treating patients, which often results in that only a limited amount of labeled CT images is available. Although recent semi-supervised learning algorithms may alleviate the problem of annotation scarcity, limited real-worl...

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Autores principales: Li, Wei, Chen, Jinlin, Chen, Ping, Yu, Lequan, Cui, Xiaohui, Li, Yiwei, Cheng, Fang, Ouyang, Wen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8153959/
https://www.ncbi.nlm.nih.gov/pubmed/34127245
http://dx.doi.org/10.1016/j.artmed.2021.102082
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author Li, Wei
Chen, Jinlin
Chen, Ping
Yu, Lequan
Cui, Xiaohui
Li, Yiwei
Cheng, Fang
Ouyang, Wen
author_facet Li, Wei
Chen, Jinlin
Chen, Ping
Yu, Lequan
Cui, Xiaohui
Li, Yiwei
Cheng, Fang
Ouyang, Wen
author_sort Li, Wei
collection PubMed
description During pandemics (e.g., COVID-19) physicians have to focus on diagnosing and treating patients, which often results in that only a limited amount of labeled CT images is available. Although recent semi-supervised learning algorithms may alleviate the problem of annotation scarcity, limited real-world CT images still cause those algorithms producing inaccurate detection results, especially in real-world COVID-19 cases. Existing models often cannot detect the small infected regions in COVID-19 CT images, such a challenge implicitly causes that many patients with minor symptoms are misdiagnosed and develop more severe symptoms, causing a higher mortality. In this paper, we propose a new method to address this challenge. Not only can we detect severe cases, but also detect minor symptoms using real-world COVID-19 CT images in which the source domain only includes limited labeled CT images but the target domain has a lot of unlabeled CT images. Specifically, we adopt Network-in-Network and Instance Normalization to build a new module (we term it NI module) and extract discriminative representations from CT images from both source and target domains. A domain classifier is utilized to implement infected region adaptation from source domain to target domain in an Adversarial Learning manner, and learns domain-invariant region proposal network (RPN) in the Faster R-CNN model. We call our model NIA-Network (Network-in-Network, Instance Normalization and Adversarial Learning), and conduct extensive experiments on two COVID-19 datasets to validate our approach. The experimental results show that our model can effectively detect infected regions with different sizes and achieve the highest diagnostic accuracy compared with existing SOTA methods.
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spelling pubmed-81539592021-05-28 NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis Li, Wei Chen, Jinlin Chen, Ping Yu, Lequan Cui, Xiaohui Li, Yiwei Cheng, Fang Ouyang, Wen Artif Intell Med Article During pandemics (e.g., COVID-19) physicians have to focus on diagnosing and treating patients, which often results in that only a limited amount of labeled CT images is available. Although recent semi-supervised learning algorithms may alleviate the problem of annotation scarcity, limited real-world CT images still cause those algorithms producing inaccurate detection results, especially in real-world COVID-19 cases. Existing models often cannot detect the small infected regions in COVID-19 CT images, such a challenge implicitly causes that many patients with minor symptoms are misdiagnosed and develop more severe symptoms, causing a higher mortality. In this paper, we propose a new method to address this challenge. Not only can we detect severe cases, but also detect minor symptoms using real-world COVID-19 CT images in which the source domain only includes limited labeled CT images but the target domain has a lot of unlabeled CT images. Specifically, we adopt Network-in-Network and Instance Normalization to build a new module (we term it NI module) and extract discriminative representations from CT images from both source and target domains. A domain classifier is utilized to implement infected region adaptation from source domain to target domain in an Adversarial Learning manner, and learns domain-invariant region proposal network (RPN) in the Faster R-CNN model. We call our model NIA-Network (Network-in-Network, Instance Normalization and Adversarial Learning), and conduct extensive experiments on two COVID-19 datasets to validate our approach. The experimental results show that our model can effectively detect infected regions with different sizes and achieve the highest diagnostic accuracy compared with existing SOTA methods. Elsevier B.V. 2021-07 2021-05-02 /pmc/articles/PMC8153959/ /pubmed/34127245 http://dx.doi.org/10.1016/j.artmed.2021.102082 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Li, Wei
Chen, Jinlin
Chen, Ping
Yu, Lequan
Cui, Xiaohui
Li, Yiwei
Cheng, Fang
Ouyang, Wen
NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis
title NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis
title_full NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis
title_fullStr NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis
title_full_unstemmed NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis
title_short NIA-Network: Towards improving lung CT infection detection for COVID-19 diagnosis
title_sort nia-network: towards improving lung ct infection detection for covid-19 diagnosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8153959/
https://www.ncbi.nlm.nih.gov/pubmed/34127245
http://dx.doi.org/10.1016/j.artmed.2021.102082
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