Cargando…
Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea
Marseille-P9602(T) is a Chryseobacterium-like strain that we isolated from planarian Schmidtea mediterranea and characterized by taxono-genomic approach. We found that Marseille-P9602(T) strain exhibits a 16S rRNA gene sequence similarity of 98.76% with Chryseobacterium scophthalmum LMG 13028(T) str...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8155073/ https://www.ncbi.nlm.nih.gov/pubmed/34040129 http://dx.doi.org/10.1038/s41598-021-90562-3 |
_version_ | 1783699133274521600 |
---|---|
author | Kangale, Luis Johnson Raoult, Didier Ghigo, Eric Fournier, Pierre-Edouard |
author_facet | Kangale, Luis Johnson Raoult, Didier Ghigo, Eric Fournier, Pierre-Edouard |
author_sort | Kangale, Luis Johnson |
collection | PubMed |
description | Marseille-P9602(T) is a Chryseobacterium-like strain that we isolated from planarian Schmidtea mediterranea and characterized by taxono-genomic approach. We found that Marseille-P9602(T) strain exhibits a 16S rRNA gene sequence similarity of 98.76% with Chryseobacterium scophthalmum LMG 13028(T) strain, the closest phylogenetic neighbor. Marseille-P9602(T) strain was observed to be a yellowish-pigmented, Gram-negative, rod-shaped bacterium, growing in aerobic conditions and belonging to the Flavobacteriaceae family. The major fatty acids detected are 13-methyl-tetradecanoic acid (57%), 15-methylhexadecenoic acid (18%) and 12-methyl-tetradecanoic acid (8%). Marseille-P9602 strain size was found from genome assembly to be of 4,271,905 bp, with a 35.5% G + C content. The highest values obtained for Ortho-ANI and dDDH were 91.67% and 44.60%, respectively. Thus, hereby we unravel that Marseille-P9602 strain is sufficiently different from other closed related species and can be classified as a novel bacterial species, for which we propose the name of Chryseobacterium schmidteae sp. nov. Type strain is Marseille-P9602(T) (= CSUR P9602(T) = CECT 30295(T)). |
format | Online Article Text |
id | pubmed-8155073 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81550732021-05-27 Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea Kangale, Luis Johnson Raoult, Didier Ghigo, Eric Fournier, Pierre-Edouard Sci Rep Article Marseille-P9602(T) is a Chryseobacterium-like strain that we isolated from planarian Schmidtea mediterranea and characterized by taxono-genomic approach. We found that Marseille-P9602(T) strain exhibits a 16S rRNA gene sequence similarity of 98.76% with Chryseobacterium scophthalmum LMG 13028(T) strain, the closest phylogenetic neighbor. Marseille-P9602(T) strain was observed to be a yellowish-pigmented, Gram-negative, rod-shaped bacterium, growing in aerobic conditions and belonging to the Flavobacteriaceae family. The major fatty acids detected are 13-methyl-tetradecanoic acid (57%), 15-methylhexadecenoic acid (18%) and 12-methyl-tetradecanoic acid (8%). Marseille-P9602 strain size was found from genome assembly to be of 4,271,905 bp, with a 35.5% G + C content. The highest values obtained for Ortho-ANI and dDDH were 91.67% and 44.60%, respectively. Thus, hereby we unravel that Marseille-P9602 strain is sufficiently different from other closed related species and can be classified as a novel bacterial species, for which we propose the name of Chryseobacterium schmidteae sp. nov. Type strain is Marseille-P9602(T) (= CSUR P9602(T) = CECT 30295(T)). Nature Publishing Group UK 2021-05-26 /pmc/articles/PMC8155073/ /pubmed/34040129 http://dx.doi.org/10.1038/s41598-021-90562-3 Text en © The Author(s) 2021, corrected publication 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kangale, Luis Johnson Raoult, Didier Ghigo, Eric Fournier, Pierre-Edouard Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea |
title | Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea |
title_full | Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea |
title_fullStr | Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea |
title_full_unstemmed | Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea |
title_short | Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea |
title_sort | chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian schmidtea mediterranea |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8155073/ https://www.ncbi.nlm.nih.gov/pubmed/34040129 http://dx.doi.org/10.1038/s41598-021-90562-3 |
work_keys_str_mv | AT kangaleluisjohnson chryseobacteriumschmidteaespnovanovelbacterialspeciesisolatedfromplanarianschmidteamediterranea AT raoultdidier chryseobacteriumschmidteaespnovanovelbacterialspeciesisolatedfromplanarianschmidteamediterranea AT ghigoeric chryseobacteriumschmidteaespnovanovelbacterialspeciesisolatedfromplanarianschmidteamediterranea AT fournierpierreedouard chryseobacteriumschmidteaespnovanovelbacterialspeciesisolatedfromplanarianschmidteamediterranea |