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Polymorphism of genetic ambigrams

Double synonyms in the genetic code can be used as a tool to test competing hypotheses regarding ambigrammatic narnavirus genomes. Applying the analysis to recent observations of Culex narnavirus 1 and Zhejiang mosquito virus 3 ambigrammatic viruses indicates that the open reading frame on the compl...

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Detalles Bibliográficos
Autores principales: Dudas, Gytis, Huber, Greg, Wilkinson, Michael, Yllanes, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8155312/
https://www.ncbi.nlm.nih.gov/pubmed/34055388
http://dx.doi.org/10.1093/ve/veab038
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author Dudas, Gytis
Huber, Greg
Wilkinson, Michael
Yllanes, David
author_facet Dudas, Gytis
Huber, Greg
Wilkinson, Michael
Yllanes, David
author_sort Dudas, Gytis
collection PubMed
description Double synonyms in the genetic code can be used as a tool to test competing hypotheses regarding ambigrammatic narnavirus genomes. Applying the analysis to recent observations of Culex narnavirus 1 and Zhejiang mosquito virus 3 ambigrammatic viruses indicates that the open reading frame on the complementary strand of the segment coding for RNA-dependent RNA polymerase does not code for a functional protein. Culex narnavirus 1 has been shown to possess a second segment, also ambigrammatic, termed ‘Robin’. We find a comparable segment for Zhejiang mosquito virus 3, a moderately diverged relative of Culex narnavirus 1. Our analysis of Robin polymorphisms suggests that its reverse open reading frame also does not code for a functional protein. We make a hypothesis about its role.
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spelling pubmed-81553122021-05-28 Polymorphism of genetic ambigrams Dudas, Gytis Huber, Greg Wilkinson, Michael Yllanes, David Virus Evol Research Article Double synonyms in the genetic code can be used as a tool to test competing hypotheses regarding ambigrammatic narnavirus genomes. Applying the analysis to recent observations of Culex narnavirus 1 and Zhejiang mosquito virus 3 ambigrammatic viruses indicates that the open reading frame on the complementary strand of the segment coding for RNA-dependent RNA polymerase does not code for a functional protein. Culex narnavirus 1 has been shown to possess a second segment, also ambigrammatic, termed ‘Robin’. We find a comparable segment for Zhejiang mosquito virus 3, a moderately diverged relative of Culex narnavirus 1. Our analysis of Robin polymorphisms suggests that its reverse open reading frame also does not code for a functional protein. We make a hypothesis about its role. Oxford University Press 2021-04-19 /pmc/articles/PMC8155312/ /pubmed/34055388 http://dx.doi.org/10.1093/ve/veab038 Text en © The Author(s) 2021. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Dudas, Gytis
Huber, Greg
Wilkinson, Michael
Yllanes, David
Polymorphism of genetic ambigrams
title Polymorphism of genetic ambigrams
title_full Polymorphism of genetic ambigrams
title_fullStr Polymorphism of genetic ambigrams
title_full_unstemmed Polymorphism of genetic ambigrams
title_short Polymorphism of genetic ambigrams
title_sort polymorphism of genetic ambigrams
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8155312/
https://www.ncbi.nlm.nih.gov/pubmed/34055388
http://dx.doi.org/10.1093/ve/veab038
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