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Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning

Diffuse gliomas are the most common primary brain tumors and they vary considerably in their morphology, location, genetic alterations, and response to therapy. In 2016, the World Health Organization (WHO) provided new guidelines for making an integrated diagnosis that incorporates both morphologic...

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Autores principales: Im, Sanghyuk, Hyeon, Jonghwan, Rha, Eunyoung, Lee, Janghyeon, Choi, Ho-Jin, Jung, Yuchae, Kim, Tae-Jung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8156672/
https://www.ncbi.nlm.nih.gov/pubmed/34067934
http://dx.doi.org/10.3390/s21103500
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author Im, Sanghyuk
Hyeon, Jonghwan
Rha, Eunyoung
Lee, Janghyeon
Choi, Ho-Jin
Jung, Yuchae
Kim, Tae-Jung
author_facet Im, Sanghyuk
Hyeon, Jonghwan
Rha, Eunyoung
Lee, Janghyeon
Choi, Ho-Jin
Jung, Yuchae
Kim, Tae-Jung
author_sort Im, Sanghyuk
collection PubMed
description Diffuse gliomas are the most common primary brain tumors and they vary considerably in their morphology, location, genetic alterations, and response to therapy. In 2016, the World Health Organization (WHO) provided new guidelines for making an integrated diagnosis that incorporates both morphologic and molecular features to diffuse gliomas. In this study, we demonstrate how deep learning approaches can be used for an automatic classification of glioma subtypes and grading using whole-slide images that were obtained from routine clinical practice. A deep transfer learning method using the ResNet50V2 model was trained to classify subtypes and grades of diffuse gliomas according to the WHO’s new 2016 classification. The balanced accuracy of the diffuse glioma subtype classification model with majority voting was 0.8727. These results highlight an emerging role of deep learning in the future practice of pathologic diagnosis.
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spelling pubmed-81566722021-05-28 Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning Im, Sanghyuk Hyeon, Jonghwan Rha, Eunyoung Lee, Janghyeon Choi, Ho-Jin Jung, Yuchae Kim, Tae-Jung Sensors (Basel) Communication Diffuse gliomas are the most common primary brain tumors and they vary considerably in their morphology, location, genetic alterations, and response to therapy. In 2016, the World Health Organization (WHO) provided new guidelines for making an integrated diagnosis that incorporates both morphologic and molecular features to diffuse gliomas. In this study, we demonstrate how deep learning approaches can be used for an automatic classification of glioma subtypes and grading using whole-slide images that were obtained from routine clinical practice. A deep transfer learning method using the ResNet50V2 model was trained to classify subtypes and grades of diffuse gliomas according to the WHO’s new 2016 classification. The balanced accuracy of the diffuse glioma subtype classification model with majority voting was 0.8727. These results highlight an emerging role of deep learning in the future practice of pathologic diagnosis. MDPI 2021-05-17 /pmc/articles/PMC8156672/ /pubmed/34067934 http://dx.doi.org/10.3390/s21103500 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Im, Sanghyuk
Hyeon, Jonghwan
Rha, Eunyoung
Lee, Janghyeon
Choi, Ho-Jin
Jung, Yuchae
Kim, Tae-Jung
Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning
title Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning
title_full Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning
title_fullStr Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning
title_full_unstemmed Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning
title_short Classification of Diffuse Glioma Subtype from Clinical-Grade Pathological Images Using Deep Transfer Learning
title_sort classification of diffuse glioma subtype from clinical-grade pathological images using deep transfer learning
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8156672/
https://www.ncbi.nlm.nih.gov/pubmed/34067934
http://dx.doi.org/10.3390/s21103500
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