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Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts
Alternative (‘repeat’) determinations of organic crystal structures deposited in the Cambridge Structural Database are analysed to characterise the nature and magnitude of the differences between structure solutions obtained by diffraction methods. Of the 3132 structure pairs considered, over 20% ex...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8157514/ https://www.ncbi.nlm.nih.gov/pubmed/34122800 http://dx.doi.org/10.1039/c9sc04964a |
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author | Widdifield, Cory M. Farrell, James D. Cole, Jason C. Howard, Judith A. K. Hodgkinson, Paul |
author_facet | Widdifield, Cory M. Farrell, James D. Cole, Jason C. Howard, Judith A. K. Hodgkinson, Paul |
author_sort | Widdifield, Cory M. |
collection | PubMed |
description | Alternative (‘repeat’) determinations of organic crystal structures deposited in the Cambridge Structural Database are analysed to characterise the nature and magnitude of the differences between structure solutions obtained by diffraction methods. Of the 3132 structure pairs considered, over 20% exhibited local structural differences exceeding 0.25 Å. In most cases (about 83%), structural optimisation using density functional theory (DFT) resolved the differences. Many of the cases where distinct and chemically significant structural differences remained after optimisation involved differently positioned hydroxyl groups, with obvious implications for the correct description of hydrogen bonding. (1)H and (13)C chemical shifts from solid-state NMR experiments are proposed as an independent methodology in cases where DFT optimisation fails to resolve discrepancies. |
format | Online Article Text |
id | pubmed-8157514 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-81575142021-06-11 Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts Widdifield, Cory M. Farrell, James D. Cole, Jason C. Howard, Judith A. K. Hodgkinson, Paul Chem Sci Chemistry Alternative (‘repeat’) determinations of organic crystal structures deposited in the Cambridge Structural Database are analysed to characterise the nature and magnitude of the differences between structure solutions obtained by diffraction methods. Of the 3132 structure pairs considered, over 20% exhibited local structural differences exceeding 0.25 Å. In most cases (about 83%), structural optimisation using density functional theory (DFT) resolved the differences. Many of the cases where distinct and chemically significant structural differences remained after optimisation involved differently positioned hydroxyl groups, with obvious implications for the correct description of hydrogen bonding. (1)H and (13)C chemical shifts from solid-state NMR experiments are proposed as an independent methodology in cases where DFT optimisation fails to resolve discrepancies. The Royal Society of Chemistry 2020-02-24 /pmc/articles/PMC8157514/ /pubmed/34122800 http://dx.doi.org/10.1039/c9sc04964a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Widdifield, Cory M. Farrell, James D. Cole, Jason C. Howard, Judith A. K. Hodgkinson, Paul Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts |
title | Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts |
title_full | Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts |
title_fullStr | Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts |
title_full_unstemmed | Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts |
title_short | Resolving alternative organic crystal structures using density functional theory and NMR chemical shifts |
title_sort | resolving alternative organic crystal structures using density functional theory and nmr chemical shifts |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8157514/ https://www.ncbi.nlm.nih.gov/pubmed/34122800 http://dx.doi.org/10.1039/c9sc04964a |
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