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The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin
Bambusa vulgaris cv. Wamin is an attractive ornamental bamboo species of southern China. It has large swollen internodes and weeping culms, and it has considerable economic importance. In the present study, we sequenced the complete chloroplast genome of B. vulgaris cv. Wamin and reported it for the...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158187/ https://www.ncbi.nlm.nih.gov/pubmed/34104745 http://dx.doi.org/10.1080/23802359.2021.1927870 |
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author | Deng, Zhiwen Huang, Liting Zhang, Meng Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Linyan Rong, Jundong Chen, Liguang Zheng, Yushan |
author_facet | Deng, Zhiwen Huang, Liting Zhang, Meng Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Linyan Rong, Jundong Chen, Liguang Zheng, Yushan |
author_sort | Deng, Zhiwen |
collection | PubMed |
description | Bambusa vulgaris cv. Wamin is an attractive ornamental bamboo species of southern China. It has large swollen internodes and weeping culms, and it has considerable economic importance. In the present study, we sequenced the complete chloroplast genome of B. vulgaris cv. Wamin and reported it for the first time. The genome was 139,528 bp in total length, including a large single-copy (LSC) region of 83,038 bp, a small single-copy (SSC) region of 12,893 bp, and a pair of invert repeats (IR) regions of 21,799 bp. Plastid genome contained 138 genes, 82 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The overall GC content of the genome was 38.9%. The phylogenetic analysis based on the complete chloroplast genome reveals that B. vulgaris cv. Wamin is closely related to Bambusa teres. This research strengthens the genetic information of both the B. vulgaris cv. Wamin and the phylogenetic analyses of Gramineae. |
format | Online Article Text |
id | pubmed-8158187 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-81581872021-06-07 The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin Deng, Zhiwen Huang, Liting Zhang, Meng Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Linyan Rong, Jundong Chen, Liguang Zheng, Yushan Mitochondrial DNA B Resour Mitogenome Announcement Bambusa vulgaris cv. Wamin is an attractive ornamental bamboo species of southern China. It has large swollen internodes and weeping culms, and it has considerable economic importance. In the present study, we sequenced the complete chloroplast genome of B. vulgaris cv. Wamin and reported it for the first time. The genome was 139,528 bp in total length, including a large single-copy (LSC) region of 83,038 bp, a small single-copy (SSC) region of 12,893 bp, and a pair of invert repeats (IR) regions of 21,799 bp. Plastid genome contained 138 genes, 82 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The overall GC content of the genome was 38.9%. The phylogenetic analysis based on the complete chloroplast genome reveals that B. vulgaris cv. Wamin is closely related to Bambusa teres. This research strengthens the genetic information of both the B. vulgaris cv. Wamin and the phylogenetic analyses of Gramineae. Taylor & Francis 2021-05-21 /pmc/articles/PMC8158187/ /pubmed/34104745 http://dx.doi.org/10.1080/23802359.2021.1927870 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Deng, Zhiwen Huang, Liting Zhang, Meng Tarin, Muhammad Waqqas Khan He, Tianyou Chen, Linyan Rong, Jundong Chen, Liguang Zheng, Yushan The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin |
title | The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin |
title_full | The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin |
title_fullStr | The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin |
title_full_unstemmed | The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin |
title_short | The complete chloroplast genome sequence of Bambusa vulgaris cv. Wamin |
title_sort | complete chloroplast genome sequence of bambusa vulgaris cv. wamin |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158187/ https://www.ncbi.nlm.nih.gov/pubmed/34104745 http://dx.doi.org/10.1080/23802359.2021.1927870 |
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