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The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant
Pluchea pteropoda Hemsl is a mangrove associate plant of Asteraceae with medicinal properties such as anti-inflammation and fever-relieving. Here, our study presented the complete chloroplast (cp) genome of Pluchea pteropoda Hemsl. The cp genome of P. pteropoda was 152,300 bp in length, including a...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158197/ https://www.ncbi.nlm.nih.gov/pubmed/34104753 http://dx.doi.org/10.1080/23802359.2021.1930600 |
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author | Liang, Zhenbiao Xie, Xuena Liang, Yongshan Zhang, Haiyong Zhao, Weiguo Tang, Lei Chao, Zhi |
author_facet | Liang, Zhenbiao Xie, Xuena Liang, Yongshan Zhang, Haiyong Zhao, Weiguo Tang, Lei Chao, Zhi |
author_sort | Liang, Zhenbiao |
collection | PubMed |
description | Pluchea pteropoda Hemsl is a mangrove associate plant of Asteraceae with medicinal properties such as anti-inflammation and fever-relieving. Here, our study presented the complete chloroplast (cp) genome of Pluchea pteropoda Hemsl. The cp genome of P. pteropoda was 152,300 bp in length, including a large single copy (LSC) region of 84,127 bp, a small single copy (SSC) region of 18,093 bp and a pair of inverted repeats (IR) regions of 25,040 bp. A total of 111 unique genes were found, comprising 79 protein-coding genes, 28 tRNA genes, and 4 rRNA genes. The GC content of the cp genome was 37.5%. Phylogenetic analysis suggested that P. pteropoda nested in Pluchea clade, which was closely related to Ageratina adenophora and Senecio scandens. The work provides beneficial data for following researches on the genetic variation, species delimitation, phylogeny and classification of Pluchea genus. |
format | Online Article Text |
id | pubmed-8158197 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-81581972021-06-07 The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant Liang, Zhenbiao Xie, Xuena Liang, Yongshan Zhang, Haiyong Zhao, Weiguo Tang, Lei Chao, Zhi Mitochondrial DNA B Resour Mitogenome Announcement Pluchea pteropoda Hemsl is a mangrove associate plant of Asteraceae with medicinal properties such as anti-inflammation and fever-relieving. Here, our study presented the complete chloroplast (cp) genome of Pluchea pteropoda Hemsl. The cp genome of P. pteropoda was 152,300 bp in length, including a large single copy (LSC) region of 84,127 bp, a small single copy (SSC) region of 18,093 bp and a pair of inverted repeats (IR) regions of 25,040 bp. A total of 111 unique genes were found, comprising 79 protein-coding genes, 28 tRNA genes, and 4 rRNA genes. The GC content of the cp genome was 37.5%. Phylogenetic analysis suggested that P. pteropoda nested in Pluchea clade, which was closely related to Ageratina adenophora and Senecio scandens. The work provides beneficial data for following researches on the genetic variation, species delimitation, phylogeny and classification of Pluchea genus. Taylor & Francis 2021-05-24 /pmc/articles/PMC8158197/ /pubmed/34104753 http://dx.doi.org/10.1080/23802359.2021.1930600 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Liang, Zhenbiao Xie, Xuena Liang, Yongshan Zhang, Haiyong Zhao, Weiguo Tang, Lei Chao, Zhi The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant |
title | The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant |
title_full | The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant |
title_fullStr | The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant |
title_full_unstemmed | The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant |
title_short | The complete chloroplast genome of Pluchea pteropoda Hemsl, a mangrove associate plant |
title_sort | complete chloroplast genome of pluchea pteropoda hemsl, a mangrove associate plant |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158197/ https://www.ncbi.nlm.nih.gov/pubmed/34104753 http://dx.doi.org/10.1080/23802359.2021.1930600 |
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