Cargando…
The complete chloroplast genome sequence of Dryobalanops aromatica
Dryobalanops aromatica is a new species in the family of Lauraceae with high content of D-borneol, which is an important raw material of premium spices and medicine widely used in China. The genome and the molecular phylogenetic relation of this novel species had not been analyzed before. In this st...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158246/ https://www.ncbi.nlm.nih.gov/pubmed/34104738 http://dx.doi.org/10.1080/23802359.2021.1914223 |
_version_ | 1783699844124114944 |
---|---|
author | Wang, Jihua Huang, Weizhong Cai, Shike Zhao, Junliang |
author_facet | Wang, Jihua Huang, Weizhong Cai, Shike Zhao, Junliang |
author_sort | Wang, Jihua |
collection | PubMed |
description | Dryobalanops aromatica is a new species in the family of Lauraceae with high content of D-borneol, which is an important raw material of premium spices and medicine widely used in China. The genome and the molecular phylogenetic relation of this novel species had not been analyzed before. In this study, we present the complete sequence of chloroplast genome of D. aromatic, as well as its genome annotation. The complete chloroplast sequences in length were 152,696 bp, with two single-copy regions 93,610 bp and 18,902 bp in length, which were separated by two inverted repeat regions with 20,092 bp in length. In total, 128 genes were predicted with GC content at 39.16%. Phylogenetic analysis showed that D. aromatica is closest to Gossypium sturtianum in Lauraceae. The sequence and annotation of the chloroplast genome of Dryobalanops aromatic will be useful for further studies on the taxonomy in Lauraceae. |
format | Online Article Text |
id | pubmed-8158246 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-81582462021-06-07 The complete chloroplast genome sequence of Dryobalanops aromatica Wang, Jihua Huang, Weizhong Cai, Shike Zhao, Junliang Mitochondrial DNA B Resour Mitogenome Announcement Dryobalanops aromatica is a new species in the family of Lauraceae with high content of D-borneol, which is an important raw material of premium spices and medicine widely used in China. The genome and the molecular phylogenetic relation of this novel species had not been analyzed before. In this study, we present the complete sequence of chloroplast genome of D. aromatic, as well as its genome annotation. The complete chloroplast sequences in length were 152,696 bp, with two single-copy regions 93,610 bp and 18,902 bp in length, which were separated by two inverted repeat regions with 20,092 bp in length. In total, 128 genes were predicted with GC content at 39.16%. Phylogenetic analysis showed that D. aromatica is closest to Gossypium sturtianum in Lauraceae. The sequence and annotation of the chloroplast genome of Dryobalanops aromatic will be useful for further studies on the taxonomy in Lauraceae. Taylor & Francis 2021-05-21 /pmc/articles/PMC8158246/ /pubmed/34104738 http://dx.doi.org/10.1080/23802359.2021.1914223 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Wang, Jihua Huang, Weizhong Cai, Shike Zhao, Junliang The complete chloroplast genome sequence of Dryobalanops aromatica |
title | The complete chloroplast genome sequence of Dryobalanops aromatica |
title_full | The complete chloroplast genome sequence of Dryobalanops aromatica |
title_fullStr | The complete chloroplast genome sequence of Dryobalanops aromatica |
title_full_unstemmed | The complete chloroplast genome sequence of Dryobalanops aromatica |
title_short | The complete chloroplast genome sequence of Dryobalanops aromatica |
title_sort | complete chloroplast genome sequence of dryobalanops aromatica |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158246/ https://www.ncbi.nlm.nih.gov/pubmed/34104738 http://dx.doi.org/10.1080/23802359.2021.1914223 |
work_keys_str_mv | AT wangjihua thecompletechloroplastgenomesequenceofdryobalanopsaromatica AT huangweizhong thecompletechloroplastgenomesequenceofdryobalanopsaromatica AT caishike thecompletechloroplastgenomesequenceofdryobalanopsaromatica AT zhaojunliang thecompletechloroplastgenomesequenceofdryobalanopsaromatica AT wangjihua completechloroplastgenomesequenceofdryobalanopsaromatica AT huangweizhong completechloroplastgenomesequenceofdryobalanopsaromatica AT caishike completechloroplastgenomesequenceofdryobalanopsaromatica AT zhaojunliang completechloroplastgenomesequenceofdryobalanopsaromatica |