Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas

This paper reports on the complete mitochondrial (mt) genome of a horseshoe crab, Tachypleus gigas (T. gigas), in Kuala Kemaman, Terengganu, Malaysia. Whole-genome sequencing of hemocyte DNA was performed with Illumina HiSeq system and the generated reads were de novo assembled with ABySS 2.1.5 and...

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Autores principales: Sarmiento, Maria E., Chin, Kai Ling, Lau, Nyok Sean, Aziah, Ismail, Norazmi, Mohd Nor, Acosta, Armando, Ismail, Noraznawati, Yaacob, Nik Soriani
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Rapid Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158250/
https://www.ncbi.nlm.nih.gov/pubmed/34104748
http://dx.doi.org/10.1080/23802359.2021.1930213
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author Sarmiento, Maria E.
Chin, Kai Ling
Lau, Nyok Sean
Aziah, Ismail
Norazmi, Mohd Nor
Acosta, Armando
Ismail, Noraznawati
Yaacob, Nik Soriani
author_facet Sarmiento, Maria E.
Chin, Kai Ling
Lau, Nyok Sean
Aziah, Ismail
Norazmi, Mohd Nor
Acosta, Armando
Ismail, Noraznawati
Yaacob, Nik Soriani
author_sort Sarmiento, Maria E.
collection PubMed
description This paper reports on the complete mitochondrial (mt) genome of a horseshoe crab, Tachypleus gigas (T. gigas), in Kuala Kemaman, Terengganu, Malaysia. Whole-genome sequencing of hemocyte DNA was performed with Illumina HiSeq system and the generated reads were de novo assembled with ABySS 2.1.5 and reassembled using mitoZ against Carcinoscorpius rotundicauda and Limulus polyphemus, resulting in a contig of 15 Kb. Phylogenetic analysis of the assembled mt genome suggests that the Tachypleus gigas is closely related to Tachypleus tridentatus than to Carcinoscorpius rotundicauda.
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spelling pubmed-81582502021-06-07 Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas Sarmiento, Maria E. Chin, Kai Ling Lau, Nyok Sean Aziah, Ismail Norazmi, Mohd Nor Acosta, Armando Ismail, Noraznawati Yaacob, Nik Soriani Mitochondrial DNA B Resour Rapid Communication This paper reports on the complete mitochondrial (mt) genome of a horseshoe crab, Tachypleus gigas (T. gigas), in Kuala Kemaman, Terengganu, Malaysia. Whole-genome sequencing of hemocyte DNA was performed with Illumina HiSeq system and the generated reads were de novo assembled with ABySS 2.1.5 and reassembled using mitoZ against Carcinoscorpius rotundicauda and Limulus polyphemus, resulting in a contig of 15 Kb. Phylogenetic analysis of the assembled mt genome suggests that the Tachypleus gigas is closely related to Tachypleus tridentatus than to Carcinoscorpius rotundicauda. Taylor & Francis 2021-05-23 /pmc/articles/PMC8158250/ /pubmed/34104748 http://dx.doi.org/10.1080/23802359.2021.1930213 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rapid Communication
Sarmiento, Maria E.
Chin, Kai Ling
Lau, Nyok Sean
Aziah, Ismail
Norazmi, Mohd Nor
Acosta, Armando
Ismail, Noraznawati
Yaacob, Nik Soriani
Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas
title Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas
title_full Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas
title_fullStr Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas
title_full_unstemmed Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas
title_short Mitochondrial DNA sequence of the horseshoe crab Tachypleus gigas
title_sort mitochondrial dna sequence of the horseshoe crab tachypleus gigas
topic Rapid Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158250/
https://www.ncbi.nlm.nih.gov/pubmed/34104748
http://dx.doi.org/10.1080/23802359.2021.1930213
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