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Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning

Pancreatic cystic lesions (PCL) are a frequent and underreported incidental finding on CT scans and can transform into neoplasms with devastating consequences. We developed and evaluated an algorithm based on a two-step nnU-Net architecture for automated detection of PCL on CTs. A total of 543 cysts...

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Autores principales: Abel, Lorraine, Wasserthal, Jakob, Weikert, Thomas, Sauter, Alexander W., Nesic, Ivan, Obradovic, Marko, Yang, Shan, Manneck, Sebastian, Glessgen, Carl, Ospel, Johanna M., Stieltjes, Bram, Boll, Daniel T., Friebe, Björn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158747/
https://www.ncbi.nlm.nih.gov/pubmed/34069328
http://dx.doi.org/10.3390/diagnostics11050901
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author Abel, Lorraine
Wasserthal, Jakob
Weikert, Thomas
Sauter, Alexander W.
Nesic, Ivan
Obradovic, Marko
Yang, Shan
Manneck, Sebastian
Glessgen, Carl
Ospel, Johanna M.
Stieltjes, Bram
Boll, Daniel T.
Friebe, Björn
author_facet Abel, Lorraine
Wasserthal, Jakob
Weikert, Thomas
Sauter, Alexander W.
Nesic, Ivan
Obradovic, Marko
Yang, Shan
Manneck, Sebastian
Glessgen, Carl
Ospel, Johanna M.
Stieltjes, Bram
Boll, Daniel T.
Friebe, Björn
author_sort Abel, Lorraine
collection PubMed
description Pancreatic cystic lesions (PCL) are a frequent and underreported incidental finding on CT scans and can transform into neoplasms with devastating consequences. We developed and evaluated an algorithm based on a two-step nnU-Net architecture for automated detection of PCL on CTs. A total of 543 cysts on 221 abdominal CTs were manually segmented in 3D by a radiology resident in consensus with a board-certified radiologist specialized in abdominal radiology. This information was used to train a two-step nnU-Net for detection with the performance assessed depending on lesions’ volume and location in comparison to three human readers of varying experience. Mean sensitivity was 78.8 ± 0.1%. The sensitivity was highest for large lesions with 87.8% for cysts ≥220 mm(3) and for lesions in the distal pancreas with up to 96.2%. The number of false-positive detections for cysts ≥220 mm(3) was 0.1 per case. The algorithm’s performance was comparable to human readers. To conclude, automated detection of PCL on CTs is feasible. The proposed model could serve radiologists as a second reading tool. All imaging data and code used in this study are freely available online.
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spelling pubmed-81587472021-05-28 Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning Abel, Lorraine Wasserthal, Jakob Weikert, Thomas Sauter, Alexander W. Nesic, Ivan Obradovic, Marko Yang, Shan Manneck, Sebastian Glessgen, Carl Ospel, Johanna M. Stieltjes, Bram Boll, Daniel T. Friebe, Björn Diagnostics (Basel) Article Pancreatic cystic lesions (PCL) are a frequent and underreported incidental finding on CT scans and can transform into neoplasms with devastating consequences. We developed and evaluated an algorithm based on a two-step nnU-Net architecture for automated detection of PCL on CTs. A total of 543 cysts on 221 abdominal CTs were manually segmented in 3D by a radiology resident in consensus with a board-certified radiologist specialized in abdominal radiology. This information was used to train a two-step nnU-Net for detection with the performance assessed depending on lesions’ volume and location in comparison to three human readers of varying experience. Mean sensitivity was 78.8 ± 0.1%. The sensitivity was highest for large lesions with 87.8% for cysts ≥220 mm(3) and for lesions in the distal pancreas with up to 96.2%. The number of false-positive detections for cysts ≥220 mm(3) was 0.1 per case. The algorithm’s performance was comparable to human readers. To conclude, automated detection of PCL on CTs is feasible. The proposed model could serve radiologists as a second reading tool. All imaging data and code used in this study are freely available online. MDPI 2021-05-19 /pmc/articles/PMC8158747/ /pubmed/34069328 http://dx.doi.org/10.3390/diagnostics11050901 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Abel, Lorraine
Wasserthal, Jakob
Weikert, Thomas
Sauter, Alexander W.
Nesic, Ivan
Obradovic, Marko
Yang, Shan
Manneck, Sebastian
Glessgen, Carl
Ospel, Johanna M.
Stieltjes, Bram
Boll, Daniel T.
Friebe, Björn
Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning
title Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning
title_full Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning
title_fullStr Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning
title_full_unstemmed Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning
title_short Automated Detection of Pancreatic Cystic Lesions on CT Using Deep Learning
title_sort automated detection of pancreatic cystic lesions on ct using deep learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158747/
https://www.ncbi.nlm.nih.gov/pubmed/34069328
http://dx.doi.org/10.3390/diagnostics11050901
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