Cargando…

4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution

[Image: see text] 4-Fluoro-threonine, the only fluoro amino acid of natural origin discovered so far, is an interesting target for both synthetic and theoretical investigations. In this work, we lay the foundation for spectroscopic characterization of 4-fluoro-threonine. First, we report a diastereo...

Descripción completa

Detalles Bibliográficos
Autores principales: Potenti, Simone, Spada, Lorenzo, Fusè, Marco, Mancini, Giordano, Gualandi, Andrea, Leonardi, Costanza, Cozzi, Pier Giorgio, Puzzarini, Cristina, Barone, Vincenzo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158790/
https://www.ncbi.nlm.nih.gov/pubmed/34056467
http://dx.doi.org/10.1021/acsomega.1c01007
_version_ 1783699939695525888
author Potenti, Simone
Spada, Lorenzo
Fusè, Marco
Mancini, Giordano
Gualandi, Andrea
Leonardi, Costanza
Cozzi, Pier Giorgio
Puzzarini, Cristina
Barone, Vincenzo
author_facet Potenti, Simone
Spada, Lorenzo
Fusè, Marco
Mancini, Giordano
Gualandi, Andrea
Leonardi, Costanza
Cozzi, Pier Giorgio
Puzzarini, Cristina
Barone, Vincenzo
author_sort Potenti, Simone
collection PubMed
description [Image: see text] 4-Fluoro-threonine, the only fluoro amino acid of natural origin discovered so far, is an interesting target for both synthetic and theoretical investigations. In this work, we lay the foundation for spectroscopic characterization of 4-fluoro-threonine. First, we report a diastereoselective synthetic route, which is suitable to produce synthetic material for experimental characterization. The addition of the commercially available ethyl isocyanoacetate to benzyloxyacetaldehyde led to the corresponding benzyloxy-oxazoline, which was hydrolyzed and transformed into ethyl (4S*,5S*)-5-hydroxymethyl-2-oxo-4-oxazolidinecarboxylate in a few steps. Fluorination with diethylamino sulfur trifluoride (DAST) afforded ethyl (4S*,5S*)-5-fluoromethyl-2-oxo-4-oxazolidinecarboxylate, which was deprotected to give the desired diastereomerically pure 4-fluoro-threonine, in 8–10% overall yield. With the synthetic material in our hands, acid–base titrations have been carried out to determine acid dissociation constants and the isoelectric point, which is the testing ground for the theoretical analysis. We have used machine learning coupled with quantum chemistry at the state-of-the-art to analyze the conformational space of 4-fluoro-threonine, with the aim of gaining insights from the comparison of computational and experimental results. Indeed, we have demonstrated that our approach, which couples a last-generation double-hybrid density functional including empirical dispersion contributions with a model combining explicit first-shell molecules and a polarizable continuum for describing solvent effects, provides results and trends in remarkable agreement with experiments. Finally, the conformational analysis applied to fluoro amino acids represents an interesting study for the effect of fluorine on the stability and population of conformers.
format Online
Article
Text
id pubmed-8158790
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-81587902021-05-28 4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution Potenti, Simone Spada, Lorenzo Fusè, Marco Mancini, Giordano Gualandi, Andrea Leonardi, Costanza Cozzi, Pier Giorgio Puzzarini, Cristina Barone, Vincenzo ACS Omega [Image: see text] 4-Fluoro-threonine, the only fluoro amino acid of natural origin discovered so far, is an interesting target for both synthetic and theoretical investigations. In this work, we lay the foundation for spectroscopic characterization of 4-fluoro-threonine. First, we report a diastereoselective synthetic route, which is suitable to produce synthetic material for experimental characterization. The addition of the commercially available ethyl isocyanoacetate to benzyloxyacetaldehyde led to the corresponding benzyloxy-oxazoline, which was hydrolyzed and transformed into ethyl (4S*,5S*)-5-hydroxymethyl-2-oxo-4-oxazolidinecarboxylate in a few steps. Fluorination with diethylamino sulfur trifluoride (DAST) afforded ethyl (4S*,5S*)-5-fluoromethyl-2-oxo-4-oxazolidinecarboxylate, which was deprotected to give the desired diastereomerically pure 4-fluoro-threonine, in 8–10% overall yield. With the synthetic material in our hands, acid–base titrations have been carried out to determine acid dissociation constants and the isoelectric point, which is the testing ground for the theoretical analysis. We have used machine learning coupled with quantum chemistry at the state-of-the-art to analyze the conformational space of 4-fluoro-threonine, with the aim of gaining insights from the comparison of computational and experimental results. Indeed, we have demonstrated that our approach, which couples a last-generation double-hybrid density functional including empirical dispersion contributions with a model combining explicit first-shell molecules and a polarizable continuum for describing solvent effects, provides results and trends in remarkable agreement with experiments. Finally, the conformational analysis applied to fluoro amino acids represents an interesting study for the effect of fluorine on the stability and population of conformers. American Chemical Society 2021-05-14 /pmc/articles/PMC8158790/ /pubmed/34056467 http://dx.doi.org/10.1021/acsomega.1c01007 Text en © 2021 The Authors. Published by American Chemical Society Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Potenti, Simone
Spada, Lorenzo
Fusè, Marco
Mancini, Giordano
Gualandi, Andrea
Leonardi, Costanza
Cozzi, Pier Giorgio
Puzzarini, Cristina
Barone, Vincenzo
4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution
title 4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution
title_full 4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution
title_fullStr 4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution
title_full_unstemmed 4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution
title_short 4-Fluoro-Threonine: From Diastereoselective Synthesis to pH-Dependent Conformational Equilibrium in Aqueous Solution
title_sort 4-fluoro-threonine: from diastereoselective synthesis to ph-dependent conformational equilibrium in aqueous solution
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8158790/
https://www.ncbi.nlm.nih.gov/pubmed/34056467
http://dx.doi.org/10.1021/acsomega.1c01007
work_keys_str_mv AT potentisimone 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT spadalorenzo 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT fusemarco 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT mancinigiordano 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT gualandiandrea 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT leonardicostanza 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT cozzipiergiorgio 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT puzzarinicristina 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution
AT baronevincenzo 4fluorothreoninefromdiastereoselectivesynthesistophdependentconformationalequilibriuminaqueoussolution