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Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases

Structural parameters influencing the reactivity of metal–organic frameworks (MOF) are challenging to establish. However, understanding their effect is crucial to further develop their catalytic potential. Here, we uncovered a correlation between reaction kinetics and the morphological structure of...

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Autores principales: Loosen, Alexandra, de Azambuja, Francisco, Smolders, Simon, Moons, Jens, Simms, Charlotte, De Vos, Dirk, Parac-Vogt, Tatjana N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8159359/
https://www.ncbi.nlm.nih.gov/pubmed/34094124
http://dx.doi.org/10.1039/d0sc02136a
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author Loosen, Alexandra
de Azambuja, Francisco
Smolders, Simon
Moons, Jens
Simms, Charlotte
De Vos, Dirk
Parac-Vogt, Tatjana N.
author_facet Loosen, Alexandra
de Azambuja, Francisco
Smolders, Simon
Moons, Jens
Simms, Charlotte
De Vos, Dirk
Parac-Vogt, Tatjana N.
author_sort Loosen, Alexandra
collection PubMed
description Structural parameters influencing the reactivity of metal–organic frameworks (MOF) are challenging to establish. However, understanding their effect is crucial to further develop their catalytic potential. Here, we uncovered a correlation between reaction kinetics and the morphological structure of MOF-nanozymes using the hydrolysis of a dipeptide under physiological pH as model reaction. Comparison of the activation parameters in the presence of NU-1000 with those observed with MOF-808 revealed the reaction outcome is largely governed by the Zr(6) cluster. Additionally, its structural environment completely changes the energy profile of the hydrolysis step, resulting in a higher energy barrier ΔG(‡) for NU-1000 due to a much larger ΔS(‡) term. The reactivity of NU-1000 towards a hen egg white lysozyme protein under physiological pH was also evaluated, and the results pointed to a selective cleavage at only 3 peptide bonds. This showcases the potential of Zr-MOFs to be developed into heterogeneous catalysts for non-enzymatic but selective transformation of biomolecules, which are crucial for many modern applications in biotechnology and proteomics.
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spelling pubmed-81593592021-06-04 Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases Loosen, Alexandra de Azambuja, Francisco Smolders, Simon Moons, Jens Simms, Charlotte De Vos, Dirk Parac-Vogt, Tatjana N. Chem Sci Chemistry Structural parameters influencing the reactivity of metal–organic frameworks (MOF) are challenging to establish. However, understanding their effect is crucial to further develop their catalytic potential. Here, we uncovered a correlation between reaction kinetics and the morphological structure of MOF-nanozymes using the hydrolysis of a dipeptide under physiological pH as model reaction. Comparison of the activation parameters in the presence of NU-1000 with those observed with MOF-808 revealed the reaction outcome is largely governed by the Zr(6) cluster. Additionally, its structural environment completely changes the energy profile of the hydrolysis step, resulting in a higher energy barrier ΔG(‡) for NU-1000 due to a much larger ΔS(‡) term. The reactivity of NU-1000 towards a hen egg white lysozyme protein under physiological pH was also evaluated, and the results pointed to a selective cleavage at only 3 peptide bonds. This showcases the potential of Zr-MOFs to be developed into heterogeneous catalysts for non-enzymatic but selective transformation of biomolecules, which are crucial for many modern applications in biotechnology and proteomics. The Royal Society of Chemistry 2020-05-22 /pmc/articles/PMC8159359/ /pubmed/34094124 http://dx.doi.org/10.1039/d0sc02136a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Loosen, Alexandra
de Azambuja, Francisco
Smolders, Simon
Moons, Jens
Simms, Charlotte
De Vos, Dirk
Parac-Vogt, Tatjana N.
Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases
title Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases
title_full Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases
title_fullStr Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases
title_full_unstemmed Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases
title_short Interplay between structural parameters and reactivity of Zr(6)-based MOFs as artificial proteases
title_sort interplay between structural parameters and reactivity of zr(6)-based mofs as artificial proteases
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8159359/
https://www.ncbi.nlm.nih.gov/pubmed/34094124
http://dx.doi.org/10.1039/d0sc02136a
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