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Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease

We report a new approach using artificial intelligence (AI) to study and classify the severity of COVID-19 using 1208 chest X-rays (CXRs) of 396 COVID-19 patients obtained through the course of the disease at Emory Healthcare affiliated hospitals (Atlanta, GA, USA). Using a two-stage transfer learni...

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Autores principales: Zandehshahvar, Mohammadreza, van Assen, Marly, Maleki, Hossein, Kiarashi, Yashar, De Cecco, Carlo N., Adibi, Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8159925/
https://www.ncbi.nlm.nih.gov/pubmed/34045510
http://dx.doi.org/10.1038/s41598-021-90411-3
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author Zandehshahvar, Mohammadreza
van Assen, Marly
Maleki, Hossein
Kiarashi, Yashar
De Cecco, Carlo N.
Adibi, Ali
author_facet Zandehshahvar, Mohammadreza
van Assen, Marly
Maleki, Hossein
Kiarashi, Yashar
De Cecco, Carlo N.
Adibi, Ali
author_sort Zandehshahvar, Mohammadreza
collection PubMed
description We report a new approach using artificial intelligence (AI) to study and classify the severity of COVID-19 using 1208 chest X-rays (CXRs) of 396 COVID-19 patients obtained through the course of the disease at Emory Healthcare affiliated hospitals (Atlanta, GA, USA). Using a two-stage transfer learning technique to train a convolutional neural network (CNN), we show that the algorithm is able to classify four classes of disease severity (normal, mild, moderate, and severe) with the average Area Under the Curve (AUC) of 0.93. In addition, we show that the outputs of different layers of the CNN under dominant filters provide valuable insight about the subtle patterns in the CXRs, which can improve the accuracy in the reading of CXRs by a radiologist. Finally, we show that our approach can be used for studying the disease progression in a single patient and its influencing factors. The results suggest that our technique can form the foundation of a more concrete clinical model to predict the evolution of COVID-19 severity and the efficacy of different treatments for each patient through using CXRs and clinical data in the early stages of the disease. This use of AI to assess the severity and possibly predicting the future stages of the disease early on, will be essential in dealing with the upcoming waves of COVID-19 and optimizing resource allocation and treatment.
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spelling pubmed-81599252021-05-28 Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease Zandehshahvar, Mohammadreza van Assen, Marly Maleki, Hossein Kiarashi, Yashar De Cecco, Carlo N. Adibi, Ali Sci Rep Article We report a new approach using artificial intelligence (AI) to study and classify the severity of COVID-19 using 1208 chest X-rays (CXRs) of 396 COVID-19 patients obtained through the course of the disease at Emory Healthcare affiliated hospitals (Atlanta, GA, USA). Using a two-stage transfer learning technique to train a convolutional neural network (CNN), we show that the algorithm is able to classify four classes of disease severity (normal, mild, moderate, and severe) with the average Area Under the Curve (AUC) of 0.93. In addition, we show that the outputs of different layers of the CNN under dominant filters provide valuable insight about the subtle patterns in the CXRs, which can improve the accuracy in the reading of CXRs by a radiologist. Finally, we show that our approach can be used for studying the disease progression in a single patient and its influencing factors. The results suggest that our technique can form the foundation of a more concrete clinical model to predict the evolution of COVID-19 severity and the efficacy of different treatments for each patient through using CXRs and clinical data in the early stages of the disease. This use of AI to assess the severity and possibly predicting the future stages of the disease early on, will be essential in dealing with the upcoming waves of COVID-19 and optimizing resource allocation and treatment. Nature Publishing Group UK 2021-05-27 /pmc/articles/PMC8159925/ /pubmed/34045510 http://dx.doi.org/10.1038/s41598-021-90411-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Zandehshahvar, Mohammadreza
van Assen, Marly
Maleki, Hossein
Kiarashi, Yashar
De Cecco, Carlo N.
Adibi, Ali
Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease
title Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease
title_full Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease
title_fullStr Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease
title_full_unstemmed Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease
title_short Toward understanding COVID-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease
title_sort toward understanding covid-19 pneumonia: a deep-learning-based approach for severity analysis and monitoring the disease
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8159925/
https://www.ncbi.nlm.nih.gov/pubmed/34045510
http://dx.doi.org/10.1038/s41598-021-90411-3
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