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Mixture Cure Models in Oncology: A Tutorial and Practical Guidance

Novel cancer therapies are associated with survival patterns that differ from established therapies, which may include survival curves that plateau after a certain follow-up time point. A fraction of the patient population is then considered statistically cured and subject to the same mortality expe...

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Autores principales: Felizzi, Federico, Paracha, Noman, Pöhlmann, Johannes, Ray, Joshua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8160049/
https://www.ncbi.nlm.nih.gov/pubmed/33638063
http://dx.doi.org/10.1007/s41669-021-00260-z
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author Felizzi, Federico
Paracha, Noman
Pöhlmann, Johannes
Ray, Joshua
author_facet Felizzi, Federico
Paracha, Noman
Pöhlmann, Johannes
Ray, Joshua
author_sort Felizzi, Federico
collection PubMed
description Novel cancer therapies are associated with survival patterns that differ from established therapies, which may include survival curves that plateau after a certain follow-up time point. A fraction of the patient population is then considered statistically cured and subject to the same mortality experience as the cancer-free general population. Mixture cure models have been developed to account for this characteristic. As compared to standard survival analysis, mixture cure models can often lead to profoundly different estimates of long-term survival, required for health economic evaluations. This tutorial is designed as a practical introduction to mixture cure models. Step-by-step instructions are provided for the entire implementation workflow, i.e., from gathering and combining data from different sources to fitting models using maximum likelihood estimation and model results interpretation. Two mixture cure models were developed to illustrate (1) an "uninformed" approach where the cure fraction is estimated from trial data and (2) an “informed” approach where the cure fraction is obtained from an external source (e.g., real-world data) used as an input to the model. These models were implemented in the statistical software R, with the freely available code on GitHub. The cure fraction can be estimated as an output from (“uninformed” approach) or used as an input to (“informed” approach) a mixture cure model. Mixture cure models suggest presumed estimates of long-term survival proportions, especially in instances where some fraction of patients is expected to be statistically cured. While this type of model may initially seem complex, it is straightforward to use and interpret. Mixture cure models have the potential to improve the accuracy of survival estimates for treatments associated with statistical cure, and the present tutorial outlines the interpretation and implementation of mixture cure models in R. This type of model will likely become more widely used in health economic analyses as novel cancer therapies enter the market. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s41669-021-00260-z.
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spelling pubmed-81600492021-06-17 Mixture Cure Models in Oncology: A Tutorial and Practical Guidance Felizzi, Federico Paracha, Noman Pöhlmann, Johannes Ray, Joshua Pharmacoecon Open Practical Application Novel cancer therapies are associated with survival patterns that differ from established therapies, which may include survival curves that plateau after a certain follow-up time point. A fraction of the patient population is then considered statistically cured and subject to the same mortality experience as the cancer-free general population. Mixture cure models have been developed to account for this characteristic. As compared to standard survival analysis, mixture cure models can often lead to profoundly different estimates of long-term survival, required for health economic evaluations. This tutorial is designed as a practical introduction to mixture cure models. Step-by-step instructions are provided for the entire implementation workflow, i.e., from gathering and combining data from different sources to fitting models using maximum likelihood estimation and model results interpretation. Two mixture cure models were developed to illustrate (1) an "uninformed" approach where the cure fraction is estimated from trial data and (2) an “informed” approach where the cure fraction is obtained from an external source (e.g., real-world data) used as an input to the model. These models were implemented in the statistical software R, with the freely available code on GitHub. The cure fraction can be estimated as an output from (“uninformed” approach) or used as an input to (“informed” approach) a mixture cure model. Mixture cure models suggest presumed estimates of long-term survival proportions, especially in instances where some fraction of patients is expected to be statistically cured. While this type of model may initially seem complex, it is straightforward to use and interpret. Mixture cure models have the potential to improve the accuracy of survival estimates for treatments associated with statistical cure, and the present tutorial outlines the interpretation and implementation of mixture cure models in R. This type of model will likely become more widely used in health economic analyses as novel cancer therapies enter the market. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s41669-021-00260-z. Springer International Publishing 2021-02-26 /pmc/articles/PMC8160049/ /pubmed/33638063 http://dx.doi.org/10.1007/s41669-021-00260-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/Open AccessThis article is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License, which permits any non-commercial use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) .
spellingShingle Practical Application
Felizzi, Federico
Paracha, Noman
Pöhlmann, Johannes
Ray, Joshua
Mixture Cure Models in Oncology: A Tutorial and Practical Guidance
title Mixture Cure Models in Oncology: A Tutorial and Practical Guidance
title_full Mixture Cure Models in Oncology: A Tutorial and Practical Guidance
title_fullStr Mixture Cure Models in Oncology: A Tutorial and Practical Guidance
title_full_unstemmed Mixture Cure Models in Oncology: A Tutorial and Practical Guidance
title_short Mixture Cure Models in Oncology: A Tutorial and Practical Guidance
title_sort mixture cure models in oncology: a tutorial and practical guidance
topic Practical Application
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8160049/
https://www.ncbi.nlm.nih.gov/pubmed/33638063
http://dx.doi.org/10.1007/s41669-021-00260-z
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