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Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis

The clinical interaction between stroke and periodontitis has been consistently studied and confirmed. Hence, exploring potentially new protein interactions in this association using bioinformatic strategies presents potential interest. In this exploratory study, we conducted a protein–protein netwo...

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Detalles Bibliográficos
Autores principales: Leira, Yago, Mascarenhas, Paulo, Blanco, Juan, Sobrino, Tomás, Mendes, José João, Machado, Vanessa, Botelho, João
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8160956/
https://www.ncbi.nlm.nih.gov/pubmed/34065604
http://dx.doi.org/10.3390/genes12050787
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author Leira, Yago
Mascarenhas, Paulo
Blanco, Juan
Sobrino, Tomás
Mendes, José João
Machado, Vanessa
Botelho, João
author_facet Leira, Yago
Mascarenhas, Paulo
Blanco, Juan
Sobrino, Tomás
Mendes, José João
Machado, Vanessa
Botelho, João
author_sort Leira, Yago
collection PubMed
description The clinical interaction between stroke and periodontitis has been consistently studied and confirmed. Hence, exploring potentially new protein interactions in this association using bioinformatic strategies presents potential interest. In this exploratory study, we conducted a protein–protein network interaction (PPI) search with documented encoded proteins for both stroke and periodontitis. Genes of interest were collected via GWAS database. The STRING database was used to predict the PPI networks, first in a sensitivity purpose (confidence cut-off of 0.7), and then with a highest confidence cut-off (0.9). Genes over-representation was inspected in the final network. As a result, we foresee a prospective protein network of interaction between stroke and periodontitis. Inflammation, pro-coagulant/pro-thrombotic state and, ultimately, atheroma plaque rupture is the main biological mechanism derived from the network. These pilot results may pave the way to future molecular and therapeutic studies to further comprehend the mechanisms between these two conditions.
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spelling pubmed-81609562021-05-29 Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis Leira, Yago Mascarenhas, Paulo Blanco, Juan Sobrino, Tomás Mendes, José João Machado, Vanessa Botelho, João Genes (Basel) Article The clinical interaction between stroke and periodontitis has been consistently studied and confirmed. Hence, exploring potentially new protein interactions in this association using bioinformatic strategies presents potential interest. In this exploratory study, we conducted a protein–protein network interaction (PPI) search with documented encoded proteins for both stroke and periodontitis. Genes of interest were collected via GWAS database. The STRING database was used to predict the PPI networks, first in a sensitivity purpose (confidence cut-off of 0.7), and then with a highest confidence cut-off (0.9). Genes over-representation was inspected in the final network. As a result, we foresee a prospective protein network of interaction between stroke and periodontitis. Inflammation, pro-coagulant/pro-thrombotic state and, ultimately, atheroma plaque rupture is the main biological mechanism derived from the network. These pilot results may pave the way to future molecular and therapeutic studies to further comprehend the mechanisms between these two conditions. MDPI 2021-05-20 /pmc/articles/PMC8160956/ /pubmed/34065604 http://dx.doi.org/10.3390/genes12050787 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Leira, Yago
Mascarenhas, Paulo
Blanco, Juan
Sobrino, Tomás
Mendes, José João
Machado, Vanessa
Botelho, João
Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis
title Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis
title_full Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis
title_fullStr Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis
title_full_unstemmed Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis
title_short Network Protein Interaction in the Link between Stroke and Periodontitis Interplay: A Pilot Bioinformatic Analysis
title_sort network protein interaction in the link between stroke and periodontitis interplay: a pilot bioinformatic analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8160956/
https://www.ncbi.nlm.nih.gov/pubmed/34065604
http://dx.doi.org/10.3390/genes12050787
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