Cargando…

Rules for the design of aza-glycine stabilized triple-helical collagen peptides

The stability of the triple-helical structure of collagen is modulated by a delicate balance of effects including polypeptide backbone geometry, a buried hydrogen bond network, dispersive interfacial interactions, and subtle stereoelectronic effects. Although the different amino acid propensities fo...

Descripción completa

Detalles Bibliográficos
Autores principales: Melton, Samuel D., Brackhahn, Emily A. E., Orlin, Samuel J., Jin, Pengfei, Chenoweth, David M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162259/
https://www.ncbi.nlm.nih.gov/pubmed/34094319
http://dx.doi.org/10.1039/d0sc03003a
_version_ 1783700673630568448
author Melton, Samuel D.
Brackhahn, Emily A. E.
Orlin, Samuel J.
Jin, Pengfei
Chenoweth, David M.
author_facet Melton, Samuel D.
Brackhahn, Emily A. E.
Orlin, Samuel J.
Jin, Pengfei
Chenoweth, David M.
author_sort Melton, Samuel D.
collection PubMed
description The stability of the triple-helical structure of collagen is modulated by a delicate balance of effects including polypeptide backbone geometry, a buried hydrogen bond network, dispersive interfacial interactions, and subtle stereoelectronic effects. Although the different amino acid propensities for the Xaa and Yaa positions of collagen's repeating (Glycine–Xaa–Yaa) primary structure have been described, our understanding of the impact of incorporating aza-glycine (azGly) residues adjacent to varied Xaa and Yaa position residues has been limited to specific sequences. Here, we detail the impact of variation in the Xaa position adjacent to an azGly residue and compare these results to our study on the impact of the Yaa position. For the first time, we present a set of design rules for azGly-stabilized triple-helical collagen peptides, accounting for all canonical amino acids in the Xaa and Yaa positions adjacent to an azGly residue, and extend these rules using multiple azGly residues. To gain atomic level insight into these new rules we present two high-resolution crystal structures of collagen triple helices, with the first peptoid-containing collagen peptide structure. In conjunction with biophysical and computational data, we highlight the critical importance of preserving the triple helix geometry and protecting the hydrogen bonding network proximal to the azGly residue from solvent. Our results provide a set of design guidelines for azGly-stabilized triple-helical collagen peptides and fundamental insight into collagen structure and stability.
format Online
Article
Text
id pubmed-8162259
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher The Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-81622592021-06-04 Rules for the design of aza-glycine stabilized triple-helical collagen peptides Melton, Samuel D. Brackhahn, Emily A. E. Orlin, Samuel J. Jin, Pengfei Chenoweth, David M. Chem Sci Chemistry The stability of the triple-helical structure of collagen is modulated by a delicate balance of effects including polypeptide backbone geometry, a buried hydrogen bond network, dispersive interfacial interactions, and subtle stereoelectronic effects. Although the different amino acid propensities for the Xaa and Yaa positions of collagen's repeating (Glycine–Xaa–Yaa) primary structure have been described, our understanding of the impact of incorporating aza-glycine (azGly) residues adjacent to varied Xaa and Yaa position residues has been limited to specific sequences. Here, we detail the impact of variation in the Xaa position adjacent to an azGly residue and compare these results to our study on the impact of the Yaa position. For the first time, we present a set of design rules for azGly-stabilized triple-helical collagen peptides, accounting for all canonical amino acids in the Xaa and Yaa positions adjacent to an azGly residue, and extend these rules using multiple azGly residues. To gain atomic level insight into these new rules we present two high-resolution crystal structures of collagen triple helices, with the first peptoid-containing collagen peptide structure. In conjunction with biophysical and computational data, we highlight the critical importance of preserving the triple helix geometry and protecting the hydrogen bonding network proximal to the azGly residue from solvent. Our results provide a set of design guidelines for azGly-stabilized triple-helical collagen peptides and fundamental insight into collagen structure and stability. The Royal Society of Chemistry 2020-07-21 /pmc/articles/PMC8162259/ /pubmed/34094319 http://dx.doi.org/10.1039/d0sc03003a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Melton, Samuel D.
Brackhahn, Emily A. E.
Orlin, Samuel J.
Jin, Pengfei
Chenoweth, David M.
Rules for the design of aza-glycine stabilized triple-helical collagen peptides
title Rules for the design of aza-glycine stabilized triple-helical collagen peptides
title_full Rules for the design of aza-glycine stabilized triple-helical collagen peptides
title_fullStr Rules for the design of aza-glycine stabilized triple-helical collagen peptides
title_full_unstemmed Rules for the design of aza-glycine stabilized triple-helical collagen peptides
title_short Rules for the design of aza-glycine stabilized triple-helical collagen peptides
title_sort rules for the design of aza-glycine stabilized triple-helical collagen peptides
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162259/
https://www.ncbi.nlm.nih.gov/pubmed/34094319
http://dx.doi.org/10.1039/d0sc03003a
work_keys_str_mv AT meltonsamueld rulesforthedesignofazaglycinestabilizedtriplehelicalcollagenpeptides
AT brackhahnemilyae rulesforthedesignofazaglycinestabilizedtriplehelicalcollagenpeptides
AT orlinsamuelj rulesforthedesignofazaglycinestabilizedtriplehelicalcollagenpeptides
AT jinpengfei rulesforthedesignofazaglycinestabilizedtriplehelicalcollagenpeptides
AT chenowethdavidm rulesforthedesignofazaglycinestabilizedtriplehelicalcollagenpeptides