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PlateEditor: A web-based application for the management of multi-well plate layouts and associated data

Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more fle...

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Detalles Bibliográficos
Autores principales: Delorme, Vincent, Woo, Minjeong, Falcão, Virginia Carla de Almeida, Wood, Connor
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162687/
https://www.ncbi.nlm.nih.gov/pubmed/34048502
http://dx.doi.org/10.1371/journal.pone.0252488
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author Delorme, Vincent
Woo, Minjeong
Falcão, Virginia Carla de Almeida
Wood, Connor
author_facet Delorme, Vincent
Woo, Minjeong
Falcão, Virginia Carla de Almeida
Wood, Connor
author_sort Delorme, Vincent
collection PubMed
description Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more flexible solution, available anywhere, free from download, installation and licensing constraints. In this context, we created PlateEditor, a free web-based, client-side application allowing rapid creation of even complex layouts, including dose-response curves and multiple combination experiments for any plate format up to 1536 wells. PlateEditor also provides heatmap visualization and aggregation features to speed-up the process of data analysis and formatting for export in other application. Written in pure JavaScript, it is fully open-source, can be integrated in various workflows and has the potential to be extended with more functionalities in the future.
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spelling pubmed-81626872021-06-10 PlateEditor: A web-based application for the management of multi-well plate layouts and associated data Delorme, Vincent Woo, Minjeong Falcão, Virginia Carla de Almeida Wood, Connor PLoS One Research Article Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more flexible solution, available anywhere, free from download, installation and licensing constraints. In this context, we created PlateEditor, a free web-based, client-side application allowing rapid creation of even complex layouts, including dose-response curves and multiple combination experiments for any plate format up to 1536 wells. PlateEditor also provides heatmap visualization and aggregation features to speed-up the process of data analysis and formatting for export in other application. Written in pure JavaScript, it is fully open-source, can be integrated in various workflows and has the potential to be extended with more functionalities in the future. Public Library of Science 2021-05-28 /pmc/articles/PMC8162687/ /pubmed/34048502 http://dx.doi.org/10.1371/journal.pone.0252488 Text en © 2021 Delorme et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Delorme, Vincent
Woo, Minjeong
Falcão, Virginia Carla de Almeida
Wood, Connor
PlateEditor: A web-based application for the management of multi-well plate layouts and associated data
title PlateEditor: A web-based application for the management of multi-well plate layouts and associated data
title_full PlateEditor: A web-based application for the management of multi-well plate layouts and associated data
title_fullStr PlateEditor: A web-based application for the management of multi-well plate layouts and associated data
title_full_unstemmed PlateEditor: A web-based application for the management of multi-well plate layouts and associated data
title_short PlateEditor: A web-based application for the management of multi-well plate layouts and associated data
title_sort plateeditor: a web-based application for the management of multi-well plate layouts and associated data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162687/
https://www.ncbi.nlm.nih.gov/pubmed/34048502
http://dx.doi.org/10.1371/journal.pone.0252488
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