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PlateEditor: A web-based application for the management of multi-well plate layouts and associated data
Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more fle...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162687/ https://www.ncbi.nlm.nih.gov/pubmed/34048502 http://dx.doi.org/10.1371/journal.pone.0252488 |
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author | Delorme, Vincent Woo, Minjeong Falcão, Virginia Carla de Almeida Wood, Connor |
author_facet | Delorme, Vincent Woo, Minjeong Falcão, Virginia Carla de Almeida Wood, Connor |
author_sort | Delorme, Vincent |
collection | PubMed |
description | Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more flexible solution, available anywhere, free from download, installation and licensing constraints. In this context, we created PlateEditor, a free web-based, client-side application allowing rapid creation of even complex layouts, including dose-response curves and multiple combination experiments for any plate format up to 1536 wells. PlateEditor also provides heatmap visualization and aggregation features to speed-up the process of data analysis and formatting for export in other application. Written in pure JavaScript, it is fully open-source, can be integrated in various workflows and has the potential to be extended with more functionalities in the future. |
format | Online Article Text |
id | pubmed-8162687 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-81626872021-06-10 PlateEditor: A web-based application for the management of multi-well plate layouts and associated data Delorme, Vincent Woo, Minjeong Falcão, Virginia Carla de Almeida Wood, Connor PLoS One Research Article Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more flexible solution, available anywhere, free from download, installation and licensing constraints. In this context, we created PlateEditor, a free web-based, client-side application allowing rapid creation of even complex layouts, including dose-response curves and multiple combination experiments for any plate format up to 1536 wells. PlateEditor also provides heatmap visualization and aggregation features to speed-up the process of data analysis and formatting for export in other application. Written in pure JavaScript, it is fully open-source, can be integrated in various workflows and has the potential to be extended with more functionalities in the future. Public Library of Science 2021-05-28 /pmc/articles/PMC8162687/ /pubmed/34048502 http://dx.doi.org/10.1371/journal.pone.0252488 Text en © 2021 Delorme et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Delorme, Vincent Woo, Minjeong Falcão, Virginia Carla de Almeida Wood, Connor PlateEditor: A web-based application for the management of multi-well plate layouts and associated data |
title | PlateEditor: A web-based application for the management of multi-well plate layouts and associated data |
title_full | PlateEditor: A web-based application for the management of multi-well plate layouts and associated data |
title_fullStr | PlateEditor: A web-based application for the management of multi-well plate layouts and associated data |
title_full_unstemmed | PlateEditor: A web-based application for the management of multi-well plate layouts and associated data |
title_short | PlateEditor: A web-based application for the management of multi-well plate layouts and associated data |
title_sort | plateeditor: a web-based application for the management of multi-well plate layouts and associated data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162687/ https://www.ncbi.nlm.nih.gov/pubmed/34048502 http://dx.doi.org/10.1371/journal.pone.0252488 |
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