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Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil

BACKGROUND: To evaluate the effectiveness of a rapid molecular test for the detection of tuberculosis (TB) and to predict the rates of disease in a municipality of Brazil where TB is endemic. METHODS: An ecological study was carried out in Ribeirão Preto-SP on a population of TB cases notified betwe...

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Autores principales: Berra, Thaís Zamboni, Gomes, Dulce, Ramos, Antônio Carlos Vieira, Alves, Yan Mathias, Bruce, Alexandre Tadashi Inomata, Arroyo, Luiz Henrique, dos Santos, Felipe Lima, Souza, Ludmilla Leideanne Limirio, Crispim, Juliane de Almeida, Arcêncio, Ricardo Alexandre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162696/
https://www.ncbi.nlm.nih.gov/pubmed/34048490
http://dx.doi.org/10.1371/journal.pone.0252375
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author Berra, Thaís Zamboni
Gomes, Dulce
Ramos, Antônio Carlos Vieira
Alves, Yan Mathias
Bruce, Alexandre Tadashi Inomata
Arroyo, Luiz Henrique
dos Santos, Felipe Lima
Souza, Ludmilla Leideanne Limirio
Crispim, Juliane de Almeida
Arcêncio, Ricardo Alexandre
author_facet Berra, Thaís Zamboni
Gomes, Dulce
Ramos, Antônio Carlos Vieira
Alves, Yan Mathias
Bruce, Alexandre Tadashi Inomata
Arroyo, Luiz Henrique
dos Santos, Felipe Lima
Souza, Ludmilla Leideanne Limirio
Crispim, Juliane de Almeida
Arcêncio, Ricardo Alexandre
author_sort Berra, Thaís Zamboni
collection PubMed
description BACKGROUND: To evaluate the effectiveness of a rapid molecular test for the detection of tuberculosis (TB) and to predict the rates of disease in a municipality of Brazil where TB is endemic. METHODS: An ecological study was carried out in Ribeirão Preto-SP on a population of TB cases notified between 2006 and 2017. Monthly TB incidence rates and the average monthly percentage change (AMPC) were calculated. In order to identify changes in the series, the breakpoint technique was performed; the rates were modelled and predictions of the incidence of TB until 2025 were made. RESULTS: AMPC showed a fall of 0.69% per month in TB and human immunodeficiency virus (TB-HIV) co-infection, a fall of 0.01% per month in general and lung TB and a fall of 0.33% per month in extrapulmonary TB. With the breakpoint technique, general and pulmonary TB changed in structure in late 2007, and extrapulmonary TB and TB-HIV co-infection changed in structure after 2014, which is considered the cut-off point. The IMA(3) models were adjusted for general and pulmonary TB and TB-HIV co-infection, and the AR(5) models for extrapulmonary TB, and predictions were performed. CONCLUSIONS: The rapid molecular test for TB is the method currently recommended by the WHO for the diagnosis of the disease and its main advantage is to provide faster, more accurate results and to already check for drug resistance. It is necessary that professionals encourage the use of this technology in order to optimize the diagnosis so that the treatment begins as quickly as possible and in an effective way. Only by uniting professionals from all areas with health policies aimed at early case identification and rapid treatment initiation it is possible to break the chain of TB transmission so that its rates decrease and the goals proposed by the WHO are achieved.
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spelling pubmed-81626962021-06-10 Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil Berra, Thaís Zamboni Gomes, Dulce Ramos, Antônio Carlos Vieira Alves, Yan Mathias Bruce, Alexandre Tadashi Inomata Arroyo, Luiz Henrique dos Santos, Felipe Lima Souza, Ludmilla Leideanne Limirio Crispim, Juliane de Almeida Arcêncio, Ricardo Alexandre PLoS One Research Article BACKGROUND: To evaluate the effectiveness of a rapid molecular test for the detection of tuberculosis (TB) and to predict the rates of disease in a municipality of Brazil where TB is endemic. METHODS: An ecological study was carried out in Ribeirão Preto-SP on a population of TB cases notified between 2006 and 2017. Monthly TB incidence rates and the average monthly percentage change (AMPC) were calculated. In order to identify changes in the series, the breakpoint technique was performed; the rates were modelled and predictions of the incidence of TB until 2025 were made. RESULTS: AMPC showed a fall of 0.69% per month in TB and human immunodeficiency virus (TB-HIV) co-infection, a fall of 0.01% per month in general and lung TB and a fall of 0.33% per month in extrapulmonary TB. With the breakpoint technique, general and pulmonary TB changed in structure in late 2007, and extrapulmonary TB and TB-HIV co-infection changed in structure after 2014, which is considered the cut-off point. The IMA(3) models were adjusted for general and pulmonary TB and TB-HIV co-infection, and the AR(5) models for extrapulmonary TB, and predictions were performed. CONCLUSIONS: The rapid molecular test for TB is the method currently recommended by the WHO for the diagnosis of the disease and its main advantage is to provide faster, more accurate results and to already check for drug resistance. It is necessary that professionals encourage the use of this technology in order to optimize the diagnosis so that the treatment begins as quickly as possible and in an effective way. Only by uniting professionals from all areas with health policies aimed at early case identification and rapid treatment initiation it is possible to break the chain of TB transmission so that its rates decrease and the goals proposed by the WHO are achieved. Public Library of Science 2021-05-28 /pmc/articles/PMC8162696/ /pubmed/34048490 http://dx.doi.org/10.1371/journal.pone.0252375 Text en © 2021 Berra et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Berra, Thaís Zamboni
Gomes, Dulce
Ramos, Antônio Carlos Vieira
Alves, Yan Mathias
Bruce, Alexandre Tadashi Inomata
Arroyo, Luiz Henrique
dos Santos, Felipe Lima
Souza, Ludmilla Leideanne Limirio
Crispim, Juliane de Almeida
Arcêncio, Ricardo Alexandre
Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil
title Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil
title_full Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil
title_fullStr Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil
title_full_unstemmed Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil
title_short Effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of GeneXpert in a city in south-eastern Brazil
title_sort effectiveness and trend forecasting of tuberculosis diagnosis after the introduction of genexpert in a city in south-eastern brazil
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162696/
https://www.ncbi.nlm.nih.gov/pubmed/34048490
http://dx.doi.org/10.1371/journal.pone.0252375
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