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Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates

Supramolecular aggregates of synthetic dye molecules offer great perspectives to prepare biomimetic functional materials for light-harvesting and energy transport. The design is complicated by the fact that structure–property relationships are hard to establish, because the molecular packing results...

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Autores principales: Bondarenko, Anna S., Patmanidis, Ilias, Alessandri, Riccardo, Souza, Paulo C. T., Jansen, Thomas L. C., de Vries, Alex H., Marrink, Siewert J., Knoester, Jasper
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162738/
https://www.ncbi.nlm.nih.gov/pubmed/34094396
http://dx.doi.org/10.1039/d0sc03110k
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author Bondarenko, Anna S.
Patmanidis, Ilias
Alessandri, Riccardo
Souza, Paulo C. T.
Jansen, Thomas L. C.
de Vries, Alex H.
Marrink, Siewert J.
Knoester, Jasper
author_facet Bondarenko, Anna S.
Patmanidis, Ilias
Alessandri, Riccardo
Souza, Paulo C. T.
Jansen, Thomas L. C.
de Vries, Alex H.
Marrink, Siewert J.
Knoester, Jasper
author_sort Bondarenko, Anna S.
collection PubMed
description Supramolecular aggregates of synthetic dye molecules offer great perspectives to prepare biomimetic functional materials for light-harvesting and energy transport. The design is complicated by the fact that structure–property relationships are hard to establish, because the molecular packing results from a delicate balance of interactions and the excitonic properties that dictate the optics and excited state dynamics, in turn sensitively depend on this packing. Here we show how an iterative multiscale approach combining molecular dynamics and quantum mechanical exciton modeling can be used to obtain accurate insight into the packing of thousands of cyanine dye molecules in a complex double-walled tubular aggregate in close interaction with its solvent environment. Our approach allows us to answer open questions not only on the structure of these prototypical aggregates, but also about their molecular-scale structural and energetic heterogeneity, as well as on the microscopic origin of their photophysical properties. This opens the route to accurate predictions of energy transport and other functional properties.
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spelling pubmed-81627382021-06-04 Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates Bondarenko, Anna S. Patmanidis, Ilias Alessandri, Riccardo Souza, Paulo C. T. Jansen, Thomas L. C. de Vries, Alex H. Marrink, Siewert J. Knoester, Jasper Chem Sci Chemistry Supramolecular aggregates of synthetic dye molecules offer great perspectives to prepare biomimetic functional materials for light-harvesting and energy transport. The design is complicated by the fact that structure–property relationships are hard to establish, because the molecular packing results from a delicate balance of interactions and the excitonic properties that dictate the optics and excited state dynamics, in turn sensitively depend on this packing. Here we show how an iterative multiscale approach combining molecular dynamics and quantum mechanical exciton modeling can be used to obtain accurate insight into the packing of thousands of cyanine dye molecules in a complex double-walled tubular aggregate in close interaction with its solvent environment. Our approach allows us to answer open questions not only on the structure of these prototypical aggregates, but also about their molecular-scale structural and energetic heterogeneity, as well as on the microscopic origin of their photophysical properties. This opens the route to accurate predictions of energy transport and other functional properties. The Royal Society of Chemistry 2020-10-01 /pmc/articles/PMC8162738/ /pubmed/34094396 http://dx.doi.org/10.1039/d0sc03110k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Bondarenko, Anna S.
Patmanidis, Ilias
Alessandri, Riccardo
Souza, Paulo C. T.
Jansen, Thomas L. C.
de Vries, Alex H.
Marrink, Siewert J.
Knoester, Jasper
Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
title Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
title_full Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
title_fullStr Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
title_full_unstemmed Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
title_short Multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
title_sort multiscale modeling of molecular structure and optical properties of complex supramolecular aggregates
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8162738/
https://www.ncbi.nlm.nih.gov/pubmed/34094396
http://dx.doi.org/10.1039/d0sc03110k
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