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Data enhanced Hammett-equation: reaction barriers in chemical space

It is intriguing how the Hammett equation enables control of chemical reactivity throughout chemical space by separating the effect of substituents from chemical process variables, such as reaction mechanism, solvent, or temperature. We generalize Hammett's original approach to predict potentia...

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Detalles Bibliográficos
Autores principales: Bragato, Marco, von Rudorff, Guido Falk, von Lilienfeld, O. Anatole
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163012/
https://www.ncbi.nlm.nih.gov/pubmed/34094415
http://dx.doi.org/10.1039/d0sc04235h
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author Bragato, Marco
von Rudorff, Guido Falk
von Lilienfeld, O. Anatole
author_facet Bragato, Marco
von Rudorff, Guido Falk
von Lilienfeld, O. Anatole
author_sort Bragato, Marco
collection PubMed
description It is intriguing how the Hammett equation enables control of chemical reactivity throughout chemical space by separating the effect of substituents from chemical process variables, such as reaction mechanism, solvent, or temperature. We generalize Hammett's original approach to predict potential energies of activation in non aromatic molecular scaffolds with multiple substituents. We use global regression to optimize Hammett parameters ρ and σ in two experimental datasets (rate constants for benzylbromides reacting with thiols and ammonium salt decomposition), as well as in a synthetic dataset consisting of computational activation energies of ∼2400 S(N)2 reactions, with various nucleophiles and leaving groups (–H, –F, –Cl, –Br) and functional groups (–H, –NO(2), –CN, –NH(3), –CH(3)). Individual substituents contribute additively to molecular σ with a unique regression term, which quantifies the inductive effect. The position dependence of substituents can be modeled by a distance decaying factor for S(N)2. Use of the Hammett equation as a base-line model for Δ-machine learning models of the activation energy in chemical space results in substantially improved learning curves reaching low prediction errors for small training sets.
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spelling pubmed-81630122021-06-04 Data enhanced Hammett-equation: reaction barriers in chemical space Bragato, Marco von Rudorff, Guido Falk von Lilienfeld, O. Anatole Chem Sci Chemistry It is intriguing how the Hammett equation enables control of chemical reactivity throughout chemical space by separating the effect of substituents from chemical process variables, such as reaction mechanism, solvent, or temperature. We generalize Hammett's original approach to predict potential energies of activation in non aromatic molecular scaffolds with multiple substituents. We use global regression to optimize Hammett parameters ρ and σ in two experimental datasets (rate constants for benzylbromides reacting with thiols and ammonium salt decomposition), as well as in a synthetic dataset consisting of computational activation energies of ∼2400 S(N)2 reactions, with various nucleophiles and leaving groups (–H, –F, –Cl, –Br) and functional groups (–H, –NO(2), –CN, –NH(3), –CH(3)). Individual substituents contribute additively to molecular σ with a unique regression term, which quantifies the inductive effect. The position dependence of substituents can be modeled by a distance decaying factor for S(N)2. Use of the Hammett equation as a base-line model for Δ-machine learning models of the activation energy in chemical space results in substantially improved learning curves reaching low prediction errors for small training sets. The Royal Society of Chemistry 2020-10-02 /pmc/articles/PMC8163012/ /pubmed/34094415 http://dx.doi.org/10.1039/d0sc04235h Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/
spellingShingle Chemistry
Bragato, Marco
von Rudorff, Guido Falk
von Lilienfeld, O. Anatole
Data enhanced Hammett-equation: reaction barriers in chemical space
title Data enhanced Hammett-equation: reaction barriers in chemical space
title_full Data enhanced Hammett-equation: reaction barriers in chemical space
title_fullStr Data enhanced Hammett-equation: reaction barriers in chemical space
title_full_unstemmed Data enhanced Hammett-equation: reaction barriers in chemical space
title_short Data enhanced Hammett-equation: reaction barriers in chemical space
title_sort data enhanced hammett-equation: reaction barriers in chemical space
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163012/
https://www.ncbi.nlm.nih.gov/pubmed/34094415
http://dx.doi.org/10.1039/d0sc04235h
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