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Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects
In addition to the classical N–H⋯O[double bond, length as m-dash]C non-covalent interaction, less conventional types of hydrogen bonding, such as N–H⋯S, may play a key role in determining the molecular structure. In this work, using theoretical calculations in combination with spectroscopic analysis...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163419/ https://www.ncbi.nlm.nih.gov/pubmed/34123167 http://dx.doi.org/10.1039/d0sc03339a |
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author | Imani, Zeynab Mundlapati, Venkateswara Rao Goldsztejn, Gildas Brenner, Valérie Gloaguen, Eric Guillot, Régis Baltaze, Jean-Pierre Le Barbu-Debus, Katia Robin, Sylvie Zehnacker, Anne Mons, Michel Aitken, David J. |
author_facet | Imani, Zeynab Mundlapati, Venkateswara Rao Goldsztejn, Gildas Brenner, Valérie Gloaguen, Eric Guillot, Régis Baltaze, Jean-Pierre Le Barbu-Debus, Katia Robin, Sylvie Zehnacker, Anne Mons, Michel Aitken, David J. |
author_sort | Imani, Zeynab |
collection | PubMed |
description | In addition to the classical N–H⋯O[double bond, length as m-dash]C non-covalent interaction, less conventional types of hydrogen bonding, such as N–H⋯S, may play a key role in determining the molecular structure. In this work, using theoretical calculations in combination with spectroscopic analysis in both gas phase and solution phase, we demonstrate that both these H-bonding modes exist simultaneously in low-energy conformers of capped derivatives of Attc, a thietane α-amino acid. 6-Membered ring inter-residue N–H⋯S interactions (C6(γ)), assisted by hyperconjugation between the thietane ring and the backbone, combine with 5-membered ring intra-residue backbone N–H⋯O[double bond, length as m-dash]C interactions (C5) to provide a C5–C6(γ) feature that stabilizes a planar geometry in the monomer unit. Two contiguous C5–C6(γ) features in the planar dimer implicate an unprecedented three-centre H-bond of the type C[double bond, length as m-dash]O⋯H(N)⋯SR(2), while the trimer adopts two C5–C6(γ) features separated by a Ramachandran α-type backbone configuration. These low-energy conformers are fully characterized in the gas phase and support is presented for their existence in solution state. |
format | Online Article Text |
id | pubmed-8163419 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-81634192021-06-11 Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects Imani, Zeynab Mundlapati, Venkateswara Rao Goldsztejn, Gildas Brenner, Valérie Gloaguen, Eric Guillot, Régis Baltaze, Jean-Pierre Le Barbu-Debus, Katia Robin, Sylvie Zehnacker, Anne Mons, Michel Aitken, David J. Chem Sci Chemistry In addition to the classical N–H⋯O[double bond, length as m-dash]C non-covalent interaction, less conventional types of hydrogen bonding, such as N–H⋯S, may play a key role in determining the molecular structure. In this work, using theoretical calculations in combination with spectroscopic analysis in both gas phase and solution phase, we demonstrate that both these H-bonding modes exist simultaneously in low-energy conformers of capped derivatives of Attc, a thietane α-amino acid. 6-Membered ring inter-residue N–H⋯S interactions (C6(γ)), assisted by hyperconjugation between the thietane ring and the backbone, combine with 5-membered ring intra-residue backbone N–H⋯O[double bond, length as m-dash]C interactions (C5) to provide a C5–C6(γ) feature that stabilizes a planar geometry in the monomer unit. Two contiguous C5–C6(γ) features in the planar dimer implicate an unprecedented three-centre H-bond of the type C[double bond, length as m-dash]O⋯H(N)⋯SR(2), while the trimer adopts two C5–C6(γ) features separated by a Ramachandran α-type backbone configuration. These low-energy conformers are fully characterized in the gas phase and support is presented for their existence in solution state. The Royal Society of Chemistry 2020-08-11 /pmc/articles/PMC8163419/ /pubmed/34123167 http://dx.doi.org/10.1039/d0sc03339a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Imani, Zeynab Mundlapati, Venkateswara Rao Goldsztejn, Gildas Brenner, Valérie Gloaguen, Eric Guillot, Régis Baltaze, Jean-Pierre Le Barbu-Debus, Katia Robin, Sylvie Zehnacker, Anne Mons, Michel Aitken, David J. Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects |
title | Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects |
title_full | Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects |
title_fullStr | Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects |
title_full_unstemmed | Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects |
title_short | Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects |
title_sort | conformation control through concurrent n–h⋯s and n–h⋯o[double bond, length as m-dash]c hydrogen bonding and hyperconjugation effects |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163419/ https://www.ncbi.nlm.nih.gov/pubmed/34123167 http://dx.doi.org/10.1039/d0sc03339a |
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