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Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects

In addition to the classical N–H⋯O[double bond, length as m-dash]C non-covalent interaction, less conventional types of hydrogen bonding, such as N–H⋯S, may play a key role in determining the molecular structure. In this work, using theoretical calculations in combination with spectroscopic analysis...

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Autores principales: Imani, Zeynab, Mundlapati, Venkateswara Rao, Goldsztejn, Gildas, Brenner, Valérie, Gloaguen, Eric, Guillot, Régis, Baltaze, Jean-Pierre, Le Barbu-Debus, Katia, Robin, Sylvie, Zehnacker, Anne, Mons, Michel, Aitken, David J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163419/
https://www.ncbi.nlm.nih.gov/pubmed/34123167
http://dx.doi.org/10.1039/d0sc03339a
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author Imani, Zeynab
Mundlapati, Venkateswara Rao
Goldsztejn, Gildas
Brenner, Valérie
Gloaguen, Eric
Guillot, Régis
Baltaze, Jean-Pierre
Le Barbu-Debus, Katia
Robin, Sylvie
Zehnacker, Anne
Mons, Michel
Aitken, David J.
author_facet Imani, Zeynab
Mundlapati, Venkateswara Rao
Goldsztejn, Gildas
Brenner, Valérie
Gloaguen, Eric
Guillot, Régis
Baltaze, Jean-Pierre
Le Barbu-Debus, Katia
Robin, Sylvie
Zehnacker, Anne
Mons, Michel
Aitken, David J.
author_sort Imani, Zeynab
collection PubMed
description In addition to the classical N–H⋯O[double bond, length as m-dash]C non-covalent interaction, less conventional types of hydrogen bonding, such as N–H⋯S, may play a key role in determining the molecular structure. In this work, using theoretical calculations in combination with spectroscopic analysis in both gas phase and solution phase, we demonstrate that both these H-bonding modes exist simultaneously in low-energy conformers of capped derivatives of Attc, a thietane α-amino acid. 6-Membered ring inter-residue N–H⋯S interactions (C6(γ)), assisted by hyperconjugation between the thietane ring and the backbone, combine with 5-membered ring intra-residue backbone N–H⋯O[double bond, length as m-dash]C interactions (C5) to provide a C5–C6(γ) feature that stabilizes a planar geometry in the monomer unit. Two contiguous C5–C6(γ) features in the planar dimer implicate an unprecedented three-centre H-bond of the type C[double bond, length as m-dash]O⋯H(N)⋯SR(2), while the trimer adopts two C5–C6(γ) features separated by a Ramachandran α-type backbone configuration. These low-energy conformers are fully characterized in the gas phase and support is presented for their existence in solution state.
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spelling pubmed-81634192021-06-11 Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects Imani, Zeynab Mundlapati, Venkateswara Rao Goldsztejn, Gildas Brenner, Valérie Gloaguen, Eric Guillot, Régis Baltaze, Jean-Pierre Le Barbu-Debus, Katia Robin, Sylvie Zehnacker, Anne Mons, Michel Aitken, David J. Chem Sci Chemistry In addition to the classical N–H⋯O[double bond, length as m-dash]C non-covalent interaction, less conventional types of hydrogen bonding, such as N–H⋯S, may play a key role in determining the molecular structure. In this work, using theoretical calculations in combination with spectroscopic analysis in both gas phase and solution phase, we demonstrate that both these H-bonding modes exist simultaneously in low-energy conformers of capped derivatives of Attc, a thietane α-amino acid. 6-Membered ring inter-residue N–H⋯S interactions (C6(γ)), assisted by hyperconjugation between the thietane ring and the backbone, combine with 5-membered ring intra-residue backbone N–H⋯O[double bond, length as m-dash]C interactions (C5) to provide a C5–C6(γ) feature that stabilizes a planar geometry in the monomer unit. Two contiguous C5–C6(γ) features in the planar dimer implicate an unprecedented three-centre H-bond of the type C[double bond, length as m-dash]O⋯H(N)⋯SR(2), while the trimer adopts two C5–C6(γ) features separated by a Ramachandran α-type backbone configuration. These low-energy conformers are fully characterized in the gas phase and support is presented for their existence in solution state. The Royal Society of Chemistry 2020-08-11 /pmc/articles/PMC8163419/ /pubmed/34123167 http://dx.doi.org/10.1039/d0sc03339a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Imani, Zeynab
Mundlapati, Venkateswara Rao
Goldsztejn, Gildas
Brenner, Valérie
Gloaguen, Eric
Guillot, Régis
Baltaze, Jean-Pierre
Le Barbu-Debus, Katia
Robin, Sylvie
Zehnacker, Anne
Mons, Michel
Aitken, David J.
Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects
title Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects
title_full Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects
title_fullStr Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects
title_full_unstemmed Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects
title_short Conformation control through concurrent N–H⋯S and N–H⋯O[double bond, length as m-dash]C hydrogen bonding and hyperconjugation effects
title_sort conformation control through concurrent n–h⋯s and n–h⋯o[double bond, length as m-dash]c hydrogen bonding and hyperconjugation effects
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163419/
https://www.ncbi.nlm.nih.gov/pubmed/34123167
http://dx.doi.org/10.1039/d0sc03339a
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