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A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA

Dimethylsulfoniopropionate (DMSP) is an abundant and ubiquitous organosulfur molecule in marine environments with important roles in global sulfur and nutrient cycling. Diverse DMSP lyases in some algae, bacteria, and fungi cleave DMSP to yield gaseous dimethyl sulfide (DMS), an infochemical with im...

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Autores principales: Li, Chun-Yang, Wang, Xiu-Juan, Chen, Xiu-Lan, Sheng, Qi, Zhang, Shan, Wang, Peng, Quareshy, Mussa, Rihtman, Branko, Shao, Xuan, Gao, Chao, Li, Fuchuan, Li, Shengying, Zhang, Weipeng, Zhang, Xiao-Hua, Yang, Gui-Peng, Todd, Jonathan D, Chen, Yin, Zhang, Yu-Zhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163506/
https://www.ncbi.nlm.nih.gov/pubmed/33970104
http://dx.doi.org/10.7554/eLife.64045
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author Li, Chun-Yang
Wang, Xiu-Juan
Chen, Xiu-Lan
Sheng, Qi
Zhang, Shan
Wang, Peng
Quareshy, Mussa
Rihtman, Branko
Shao, Xuan
Gao, Chao
Li, Fuchuan
Li, Shengying
Zhang, Weipeng
Zhang, Xiao-Hua
Yang, Gui-Peng
Todd, Jonathan D
Chen, Yin
Zhang, Yu-Zhong
author_facet Li, Chun-Yang
Wang, Xiu-Juan
Chen, Xiu-Lan
Sheng, Qi
Zhang, Shan
Wang, Peng
Quareshy, Mussa
Rihtman, Branko
Shao, Xuan
Gao, Chao
Li, Fuchuan
Li, Shengying
Zhang, Weipeng
Zhang, Xiao-Hua
Yang, Gui-Peng
Todd, Jonathan D
Chen, Yin
Zhang, Yu-Zhong
author_sort Li, Chun-Yang
collection PubMed
description Dimethylsulfoniopropionate (DMSP) is an abundant and ubiquitous organosulfur molecule in marine environments with important roles in global sulfur and nutrient cycling. Diverse DMSP lyases in some algae, bacteria, and fungi cleave DMSP to yield gaseous dimethyl sulfide (DMS), an infochemical with important roles in atmospheric chemistry. Here, we identified a novel ATP-dependent DMSP lyase, DddX. DddX belongs to the acyl-CoA synthetase superfamily and is distinct from the eight other known DMSP lyases. DddX catalyses the conversion of DMSP to DMS via a two-step reaction: the ligation of DMSP with CoA to form the intermediate DMSP-CoA, which is then cleaved to DMS and acryloyl-CoA. The novel catalytic mechanism was elucidated by structural and biochemical analyses. DddX is found in several Alphaproteobacteria, Gammaproteobacteria, and Firmicutes, suggesting that this new DMSP lyase may play an overlooked role in DMSP/DMS cycles.
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spelling pubmed-81635062021-06-02 A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA Li, Chun-Yang Wang, Xiu-Juan Chen, Xiu-Lan Sheng, Qi Zhang, Shan Wang, Peng Quareshy, Mussa Rihtman, Branko Shao, Xuan Gao, Chao Li, Fuchuan Li, Shengying Zhang, Weipeng Zhang, Xiao-Hua Yang, Gui-Peng Todd, Jonathan D Chen, Yin Zhang, Yu-Zhong eLife Ecology Dimethylsulfoniopropionate (DMSP) is an abundant and ubiquitous organosulfur molecule in marine environments with important roles in global sulfur and nutrient cycling. Diverse DMSP lyases in some algae, bacteria, and fungi cleave DMSP to yield gaseous dimethyl sulfide (DMS), an infochemical with important roles in atmospheric chemistry. Here, we identified a novel ATP-dependent DMSP lyase, DddX. DddX belongs to the acyl-CoA synthetase superfamily and is distinct from the eight other known DMSP lyases. DddX catalyses the conversion of DMSP to DMS via a two-step reaction: the ligation of DMSP with CoA to form the intermediate DMSP-CoA, which is then cleaved to DMS and acryloyl-CoA. The novel catalytic mechanism was elucidated by structural and biochemical analyses. DddX is found in several Alphaproteobacteria, Gammaproteobacteria, and Firmicutes, suggesting that this new DMSP lyase may play an overlooked role in DMSP/DMS cycles. eLife Sciences Publications, Ltd 2021-05-10 /pmc/articles/PMC8163506/ /pubmed/33970104 http://dx.doi.org/10.7554/eLife.64045 Text en © 2021, Li et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Ecology
Li, Chun-Yang
Wang, Xiu-Juan
Chen, Xiu-Lan
Sheng, Qi
Zhang, Shan
Wang, Peng
Quareshy, Mussa
Rihtman, Branko
Shao, Xuan
Gao, Chao
Li, Fuchuan
Li, Shengying
Zhang, Weipeng
Zhang, Xiao-Hua
Yang, Gui-Peng
Todd, Jonathan D
Chen, Yin
Zhang, Yu-Zhong
A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA
title A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA
title_full A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA
title_fullStr A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA
title_full_unstemmed A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA
title_short A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA
title_sort novel atp dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-coa
topic Ecology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163506/
https://www.ncbi.nlm.nih.gov/pubmed/33970104
http://dx.doi.org/10.7554/eLife.64045
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