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Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain

The challenges imposed by the ongoing outbreak of severe acute respiratory syndrome coronavirus-2 affects every aspect of our modern world, ranging from our health to our socio-economic needs. Our existence highly depends on the vaccine's availability, which demands in-depth research of the ava...

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Autores principales: Bindayna, Khalid Mubarak, Deifalla, Abdel Halim Abdel Fattah Salem, Mokbel, Hicham Ezzat Mohamed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Published by Elsevier Ltd. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163566/
https://www.ncbi.nlm.nih.gov/pubmed/34058304
http://dx.doi.org/10.1016/j.micpath.2021.104955
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author Bindayna, Khalid Mubarak
Deifalla, Abdel Halim Abdel Fattah Salem
Mokbel, Hicham Ezzat Mohamed
author_facet Bindayna, Khalid Mubarak
Deifalla, Abdel Halim Abdel Fattah Salem
Mokbel, Hicham Ezzat Mohamed
author_sort Bindayna, Khalid Mubarak
collection PubMed
description The challenges imposed by the ongoing outbreak of severe acute respiratory syndrome coronavirus-2 affects every aspect of our modern world, ranging from our health to our socio-economic needs. Our existence highly depends on the vaccine's availability, which demands in-depth research of the available strains and their mutations. In this work, we have analyzed all the available SARS-COV2 genomes isolated from the Kingdom of Bahrain in terms of their variance and origin analysis. We have predicted various known and unique mutations in the SARS-COV2 isolated from Bahrain. The complexity of the phylogenetic tree and dot plot representation of the strains mentioned above with other isolates of Asia indicates the versatility and multiple origins of Bahrain's SARS-COV2 isolates. We have also identified two high impact spike mutations from these strains which increase the virulence of SARS-COV2. Our research could have a high impact on vaccine development and distinguishes the source of SARS-COV2 in the Kingdom of Bahrain.
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spelling pubmed-81635662021-06-01 Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain Bindayna, Khalid Mubarak Deifalla, Abdel Halim Abdel Fattah Salem Mokbel, Hicham Ezzat Mohamed Microb Pathog Article The challenges imposed by the ongoing outbreak of severe acute respiratory syndrome coronavirus-2 affects every aspect of our modern world, ranging from our health to our socio-economic needs. Our existence highly depends on the vaccine's availability, which demands in-depth research of the available strains and their mutations. In this work, we have analyzed all the available SARS-COV2 genomes isolated from the Kingdom of Bahrain in terms of their variance and origin analysis. We have predicted various known and unique mutations in the SARS-COV2 isolated from Bahrain. The complexity of the phylogenetic tree and dot plot representation of the strains mentioned above with other isolates of Asia indicates the versatility and multiple origins of Bahrain's SARS-COV2 isolates. We have also identified two high impact spike mutations from these strains which increase the virulence of SARS-COV2. Our research could have a high impact on vaccine development and distinguishes the source of SARS-COV2 in the Kingdom of Bahrain. Published by Elsevier Ltd. 2021-08 2021-05-29 /pmc/articles/PMC8163566/ /pubmed/34058304 http://dx.doi.org/10.1016/j.micpath.2021.104955 Text en © 2021 Published by Elsevier Ltd. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Bindayna, Khalid Mubarak
Deifalla, Abdel Halim Abdel Fattah Salem
Mokbel, Hicham Ezzat Mohamed
Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain
title Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain
title_full Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain
title_fullStr Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain
title_full_unstemmed Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain
title_short Identification of E484K and other novel SARS-COV-2 variants from the Kingdom of Bahrain
title_sort identification of e484k and other novel sars-cov-2 variants from the kingdom of bahrain
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163566/
https://www.ncbi.nlm.nih.gov/pubmed/34058304
http://dx.doi.org/10.1016/j.micpath.2021.104955
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