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Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter

Carbon turnover in aquatic environments is dependent on biochemical properties of organic matter (OM) and its degradability by the surrounding microbial community. Non-additive interactive effects represent a mechanism where the degradation of biochemically persistent OM is stimulated by the provisi...

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Autores principales: Neubauer, Darshan, Kolmakova, Olesya, Woodhouse, Jason, Taube, Robert, Mangelsdorf, Kai, Gladyshev, Michail, Premke, Katrin, Grossart, Hans-Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163850/
https://www.ncbi.nlm.nih.gov/pubmed/33462364
http://dx.doi.org/10.1038/s41396-020-00883-w
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author Neubauer, Darshan
Kolmakova, Olesya
Woodhouse, Jason
Taube, Robert
Mangelsdorf, Kai
Gladyshev, Michail
Premke, Katrin
Grossart, Hans-Peter
author_facet Neubauer, Darshan
Kolmakova, Olesya
Woodhouse, Jason
Taube, Robert
Mangelsdorf, Kai
Gladyshev, Michail
Premke, Katrin
Grossart, Hans-Peter
author_sort Neubauer, Darshan
collection PubMed
description Carbon turnover in aquatic environments is dependent on biochemical properties of organic matter (OM) and its degradability by the surrounding microbial community. Non-additive interactive effects represent a mechanism where the degradation of biochemically persistent OM is stimulated by the provision of bioavailable OM to the degrading microbial community. Whilst this is well established in terrestrial systems, whether it occurs in aquatic ecosystems remains subject to debate. We hypothesised that OM from zooplankton carcasses can stimulate the degradation of biochemically persistent leaf material, and that this effect is influenced by the daphnia:leaf OM ratio and the complexity of the degrading microbial community. Fresh Daphnia magna carcasses and (13)C-labelled maize leaves (Zea mays) were incubated at different ratios (1:1, 1:3 and 1:5) alongside either a complex microbial community (<50 µm) or solely bacteria (<0.8 µm). (13)C stable-isotope measurements of CO(2) analyses were combined with phospholipid fatty acids (PLFA) analysis and DNA sequencing to link metabolic activities, biomass and taxonomic composition of the microbial community. Our experiments indicated a significantly higher respiration of leaf-derived C when daphnia-derived OM was most abundant (i.e. daphnia:leaf OM ratio of 1:1). This process was stronger in a complex microbial community, including eukaryotic microorganisms, than a solely bacterial community. We concluded that non-additive interactive effects were a function of increased C–N chemodiversity and microbial complexity, with the highest net respiration to be expected when chemodiversity is high and the degrading community complex. This study indicates that identifying the interactions and processes of OM degradation is one important key for a deeper understanding of aquatic and thus global carbon cycle.
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spelling pubmed-81638502021-06-10 Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter Neubauer, Darshan Kolmakova, Olesya Woodhouse, Jason Taube, Robert Mangelsdorf, Kai Gladyshev, Michail Premke, Katrin Grossart, Hans-Peter ISME J Article Carbon turnover in aquatic environments is dependent on biochemical properties of organic matter (OM) and its degradability by the surrounding microbial community. Non-additive interactive effects represent a mechanism where the degradation of biochemically persistent OM is stimulated by the provision of bioavailable OM to the degrading microbial community. Whilst this is well established in terrestrial systems, whether it occurs in aquatic ecosystems remains subject to debate. We hypothesised that OM from zooplankton carcasses can stimulate the degradation of biochemically persistent leaf material, and that this effect is influenced by the daphnia:leaf OM ratio and the complexity of the degrading microbial community. Fresh Daphnia magna carcasses and (13)C-labelled maize leaves (Zea mays) were incubated at different ratios (1:1, 1:3 and 1:5) alongside either a complex microbial community (<50 µm) or solely bacteria (<0.8 µm). (13)C stable-isotope measurements of CO(2) analyses were combined with phospholipid fatty acids (PLFA) analysis and DNA sequencing to link metabolic activities, biomass and taxonomic composition of the microbial community. Our experiments indicated a significantly higher respiration of leaf-derived C when daphnia-derived OM was most abundant (i.e. daphnia:leaf OM ratio of 1:1). This process was stronger in a complex microbial community, including eukaryotic microorganisms, than a solely bacterial community. We concluded that non-additive interactive effects were a function of increased C–N chemodiversity and microbial complexity, with the highest net respiration to be expected when chemodiversity is high and the degrading community complex. This study indicates that identifying the interactions and processes of OM degradation is one important key for a deeper understanding of aquatic and thus global carbon cycle. Nature Publishing Group UK 2021-01-18 2021-06 /pmc/articles/PMC8163850/ /pubmed/33462364 http://dx.doi.org/10.1038/s41396-020-00883-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Neubauer, Darshan
Kolmakova, Olesya
Woodhouse, Jason
Taube, Robert
Mangelsdorf, Kai
Gladyshev, Michail
Premke, Katrin
Grossart, Hans-Peter
Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter
title Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter
title_full Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter
title_fullStr Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter
title_full_unstemmed Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter
title_short Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter
title_sort zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8163850/
https://www.ncbi.nlm.nih.gov/pubmed/33462364
http://dx.doi.org/10.1038/s41396-020-00883-w
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