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Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study

Piper was used to cure certain human afflictions. It has various biological processes in literary works. Our work aims to identify and to explain the molecular base in silico in phytoderived anti-viral compounds in Piper nigrum against the major protease enzyme COVID-19. The thesis includes docking...

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Detalles Bibliográficos
Autores principales: Davella, Rakesh, Gurrapu, Swapna, Mamidala, Estari
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165080/
https://www.ncbi.nlm.nih.gov/pubmed/34094885
http://dx.doi.org/10.1016/j.matpr.2021.05.595
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author Davella, Rakesh
Gurrapu, Swapna
Mamidala, Estari
author_facet Davella, Rakesh
Gurrapu, Swapna
Mamidala, Estari
author_sort Davella, Rakesh
collection PubMed
description Piper was used to cure certain human afflictions. It has various biological processes in literary works. Our work aims to identify and to explain the molecular base in silico in phytoderived anti-viral compounds in Piper nigrum against the major protease enzyme COVID-19. The thesis includes docking and molecular dynamic modelling review of 8 phenolic compounds from Piper extracted from the PubMed database. Docking analysis with Autodock programme was conducted. Our analysis reveals that the two Piper phytochemicals are very susceptible to the COVID-19 major protease enzyme. These phyto-compounds from piper may use contemporary techniques to create a stable drug or help the detection of lead. In order to assess their efficacy against COVID-19, identified hit compounds can be taken further in vitro and in vivo tests.
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spelling pubmed-81650802021-06-01 Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study Davella, Rakesh Gurrapu, Swapna Mamidala, Estari Mater Today Proc Article Piper was used to cure certain human afflictions. It has various biological processes in literary works. Our work aims to identify and to explain the molecular base in silico in phytoderived anti-viral compounds in Piper nigrum against the major protease enzyme COVID-19. The thesis includes docking and molecular dynamic modelling review of 8 phenolic compounds from Piper extracted from the PubMed database. Docking analysis with Autodock programme was conducted. Our analysis reveals that the two Piper phytochemicals are very susceptible to the COVID-19 major protease enzyme. These phyto-compounds from piper may use contemporary techniques to create a stable drug or help the detection of lead. In order to assess their efficacy against COVID-19, identified hit compounds can be taken further in vitro and in vivo tests. Elsevier Ltd. 2022 2021-05-31 /pmc/articles/PMC8165080/ /pubmed/34094885 http://dx.doi.org/10.1016/j.matpr.2021.05.595 Text en © 2021 Elsevier Ltd. All rights reserved. Selection and peer-review under responsibility of the scientific committee of the 1st International Conference on Computations in Materials and Applied Engineering – 2021. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Davella, Rakesh
Gurrapu, Swapna
Mamidala, Estari
Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study
title Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study
title_full Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study
title_fullStr Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study
title_full_unstemmed Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study
title_short Phenolic compounds as promising drug candidates against COVID-19 - an integrated molecular docking and dynamics simulation study
title_sort phenolic compounds as promising drug candidates against covid-19 - an integrated molecular docking and dynamics simulation study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165080/
https://www.ncbi.nlm.nih.gov/pubmed/34094885
http://dx.doi.org/10.1016/j.matpr.2021.05.595
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