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Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome
Sjögren's syndrome is an autoimmune disease that can also occur in children. The disease is not well defined and there is limited information on the presence of chemokines, cytokines, and biomarkers (CCBMs) in the saliva of children that could improve their disease diagnosis. In a recent study...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165406/ https://www.ncbi.nlm.nih.gov/pubmed/34095386 http://dx.doi.org/10.1016/j.dib.2021.107139 |
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author | Withanage, Miyuraj Harishchandra Hikkaduwa Hernandez, M. Paula Gomez Starman, Emily E. Davis, Andrew B. Zeng, Erliang Lieberman, Scott M. Brogden, Kim A. Lanzel, Emily A. |
author_facet | Withanage, Miyuraj Harishchandra Hikkaduwa Hernandez, M. Paula Gomez Starman, Emily E. Davis, Andrew B. Zeng, Erliang Lieberman, Scott M. Brogden, Kim A. Lanzel, Emily A. |
author_sort | Withanage, Miyuraj Harishchandra Hikkaduwa |
collection | PubMed |
description | Sjögren's syndrome is an autoimmune disease that can also occur in children. The disease is not well defined and there is limited information on the presence of chemokines, cytokines, and biomarkers (CCBMs) in the saliva of children that could improve their disease diagnosis. In a recent study [1], we reported a large dataset of 105 CCBMs that were associated with both lymphocyte and mononuclear cell functions [2] in the saliva of 11 children formally diagnosed with Sjögren's syndrome and 16 normal healthy children. Here, we extend those findings and use the Mendeley dataset [2] to identify CCBMs that have predictive power for Sjögren's syndrome in female children. Datasets of CCBMs from all saliva samples and female children saliva samples were standardized. We used machine learning methods to select Sjögren's syndrome associated CCBMs and assessed the predictive power of selected CCBMs in these two datasets using receiver operating characteristic (ROC) curves and associated areas under curve (AUC) as metrics. We used eight classifiers to identify 16 datasets that contained from 2 to 34 CCBMs with AUC values ranging from 0.91 to 0.94. |
format | Online Article Text |
id | pubmed-8165406 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-81654062021-06-05 Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome Withanage, Miyuraj Harishchandra Hikkaduwa Hernandez, M. Paula Gomez Starman, Emily E. Davis, Andrew B. Zeng, Erliang Lieberman, Scott M. Brogden, Kim A. Lanzel, Emily A. Data Brief Data Article Sjögren's syndrome is an autoimmune disease that can also occur in children. The disease is not well defined and there is limited information on the presence of chemokines, cytokines, and biomarkers (CCBMs) in the saliva of children that could improve their disease diagnosis. In a recent study [1], we reported a large dataset of 105 CCBMs that were associated with both lymphocyte and mononuclear cell functions [2] in the saliva of 11 children formally diagnosed with Sjögren's syndrome and 16 normal healthy children. Here, we extend those findings and use the Mendeley dataset [2] to identify CCBMs that have predictive power for Sjögren's syndrome in female children. Datasets of CCBMs from all saliva samples and female children saliva samples were standardized. We used machine learning methods to select Sjögren's syndrome associated CCBMs and assessed the predictive power of selected CCBMs in these two datasets using receiver operating characteristic (ROC) curves and associated areas under curve (AUC) as metrics. We used eight classifiers to identify 16 datasets that contained from 2 to 34 CCBMs with AUC values ranging from 0.91 to 0.94. Elsevier 2021-05-14 /pmc/articles/PMC8165406/ /pubmed/34095386 http://dx.doi.org/10.1016/j.dib.2021.107139 Text en © 2021 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data Article Withanage, Miyuraj Harishchandra Hikkaduwa Hernandez, M. Paula Gomez Starman, Emily E. Davis, Andrew B. Zeng, Erliang Lieberman, Scott M. Brogden, Kim A. Lanzel, Emily A. Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome |
title | Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome |
title_full | Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome |
title_fullStr | Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome |
title_full_unstemmed | Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome |
title_short | Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome |
title_sort | dataset-chemokines, cytokines, and biomarkers in the saliva of children with sjögren's syndrome |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165406/ https://www.ncbi.nlm.nih.gov/pubmed/34095386 http://dx.doi.org/10.1016/j.dib.2021.107139 |
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