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Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome

Sjögren's syndrome is an autoimmune disease that can also occur in children. The disease is not well defined and there is limited information on the presence of chemokines, cytokines, and biomarkers (CCBMs) in the saliva of children that could improve their disease diagnosis. In a recent study...

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Autores principales: Withanage, Miyuraj Harishchandra Hikkaduwa, Hernandez, M. Paula Gomez, Starman, Emily E., Davis, Andrew B., Zeng, Erliang, Lieberman, Scott M., Brogden, Kim A., Lanzel, Emily A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165406/
https://www.ncbi.nlm.nih.gov/pubmed/34095386
http://dx.doi.org/10.1016/j.dib.2021.107139
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author Withanage, Miyuraj Harishchandra Hikkaduwa
Hernandez, M. Paula Gomez
Starman, Emily E.
Davis, Andrew B.
Zeng, Erliang
Lieberman, Scott M.
Brogden, Kim A.
Lanzel, Emily A.
author_facet Withanage, Miyuraj Harishchandra Hikkaduwa
Hernandez, M. Paula Gomez
Starman, Emily E.
Davis, Andrew B.
Zeng, Erliang
Lieberman, Scott M.
Brogden, Kim A.
Lanzel, Emily A.
author_sort Withanage, Miyuraj Harishchandra Hikkaduwa
collection PubMed
description Sjögren's syndrome is an autoimmune disease that can also occur in children. The disease is not well defined and there is limited information on the presence of chemokines, cytokines, and biomarkers (CCBMs) in the saliva of children that could improve their disease diagnosis. In a recent study [1], we reported a large dataset of 105 CCBMs that were associated with both lymphocyte and mononuclear cell functions [2] in the saliva of 11 children formally diagnosed with Sjögren's syndrome and 16 normal healthy children. Here, we extend those findings and use the Mendeley dataset [2] to identify CCBMs that have predictive power for Sjögren's syndrome in female children. Datasets of CCBMs from all saliva samples and female children saliva samples were standardized. We used machine learning methods to select Sjögren's syndrome associated CCBMs and assessed the predictive power of selected CCBMs in these two datasets using receiver operating characteristic (ROC) curves and associated areas under curve (AUC) as metrics. We used eight classifiers to identify 16 datasets that contained from 2 to 34 CCBMs with AUC values ranging from 0.91 to 0.94.
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spelling pubmed-81654062021-06-05 Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome Withanage, Miyuraj Harishchandra Hikkaduwa Hernandez, M. Paula Gomez Starman, Emily E. Davis, Andrew B. Zeng, Erliang Lieberman, Scott M. Brogden, Kim A. Lanzel, Emily A. Data Brief Data Article Sjögren's syndrome is an autoimmune disease that can also occur in children. The disease is not well defined and there is limited information on the presence of chemokines, cytokines, and biomarkers (CCBMs) in the saliva of children that could improve their disease diagnosis. In a recent study [1], we reported a large dataset of 105 CCBMs that were associated with both lymphocyte and mononuclear cell functions [2] in the saliva of 11 children formally diagnosed with Sjögren's syndrome and 16 normal healthy children. Here, we extend those findings and use the Mendeley dataset [2] to identify CCBMs that have predictive power for Sjögren's syndrome in female children. Datasets of CCBMs from all saliva samples and female children saliva samples were standardized. We used machine learning methods to select Sjögren's syndrome associated CCBMs and assessed the predictive power of selected CCBMs in these two datasets using receiver operating characteristic (ROC) curves and associated areas under curve (AUC) as metrics. We used eight classifiers to identify 16 datasets that contained from 2 to 34 CCBMs with AUC values ranging from 0.91 to 0.94. Elsevier 2021-05-14 /pmc/articles/PMC8165406/ /pubmed/34095386 http://dx.doi.org/10.1016/j.dib.2021.107139 Text en © 2021 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data Article
Withanage, Miyuraj Harishchandra Hikkaduwa
Hernandez, M. Paula Gomez
Starman, Emily E.
Davis, Andrew B.
Zeng, Erliang
Lieberman, Scott M.
Brogden, Kim A.
Lanzel, Emily A.
Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome
title Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome
title_full Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome
title_fullStr Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome
title_full_unstemmed Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome
title_short Dataset-chemokines, cytokines, and biomarkers in the saliva of children with Sjögren's syndrome
title_sort dataset-chemokines, cytokines, and biomarkers in the saliva of children with sjögren's syndrome
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165406/
https://www.ncbi.nlm.nih.gov/pubmed/34095386
http://dx.doi.org/10.1016/j.dib.2021.107139
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