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Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes

[Image: see text] Here, we report a label-free gold nanoparticle-based single-molecule optical platform to study the immobilization, activity, and thermodynamics of single enzymes. The sensor uses plasmonic gold nanoparticles coupled to optical whispering gallery modes (WGMs) to probe enzyme conform...

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Autores principales: Subramanian, Sivaraman, Jones, Hannah B.L., Frustaci, Simona, Winter, Samuel, van der Kamp, Marc W., Arcus, Vickery L., Pudney, Christopher R., Vollmer, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165693/
https://www.ncbi.nlm.nih.gov/pubmed/34085031
http://dx.doi.org/10.1021/acsanm.1c00176
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author Subramanian, Sivaraman
Jones, Hannah B.L.
Frustaci, Simona
Winter, Samuel
van der Kamp, Marc W.
Arcus, Vickery L.
Pudney, Christopher R.
Vollmer, Frank
author_facet Subramanian, Sivaraman
Jones, Hannah B.L.
Frustaci, Simona
Winter, Samuel
van der Kamp, Marc W.
Arcus, Vickery L.
Pudney, Christopher R.
Vollmer, Frank
author_sort Subramanian, Sivaraman
collection PubMed
description [Image: see text] Here, we report a label-free gold nanoparticle-based single-molecule optical platform to study the immobilization, activity, and thermodynamics of single enzymes. The sensor uses plasmonic gold nanoparticles coupled to optical whispering gallery modes (WGMs) to probe enzyme conformational dynamics during turnover at a microsecond time resolution. Using a glucosidase enzyme as the model system, we explore the temperature dependence of the enzyme turnover at the single-molecule (SM) level. A recent physical model for understanding enzyme temperature dependencies (macromolecular rate theory; MMRT) has emerged as a powerful tool to study the relationship between enzyme turnover and thermodynamics. Using WGMs, SM enzyme measurements enable us to accurately track turnover as a function of conformational changes and therefore to quantitatively probe the key feature of the MMRT model, the activation heat capacity, at the ultimate level of SM. Our data shows that WGMs are extraordinarily sensitive to protein conformational change and can discern both multiple steps with turnover as well as microscopic conformational substates within those steps. The temperature dependence studies show that the MMRT model can be applied to a range of steps within turnover at the SM scale that is associated with conformational change. Our study validates the notion that MMRT captures differences in dynamics between states. The WGM sensors provide a platform for the quantitative analysis of SM activation heat capacity, applying MMRT to the label-free sensing of microsecond substates of active enzymes.
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spelling pubmed-81656932021-06-01 Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes Subramanian, Sivaraman Jones, Hannah B.L. Frustaci, Simona Winter, Samuel van der Kamp, Marc W. Arcus, Vickery L. Pudney, Christopher R. Vollmer, Frank ACS Appl Nano Mater [Image: see text] Here, we report a label-free gold nanoparticle-based single-molecule optical platform to study the immobilization, activity, and thermodynamics of single enzymes. The sensor uses plasmonic gold nanoparticles coupled to optical whispering gallery modes (WGMs) to probe enzyme conformational dynamics during turnover at a microsecond time resolution. Using a glucosidase enzyme as the model system, we explore the temperature dependence of the enzyme turnover at the single-molecule (SM) level. A recent physical model for understanding enzyme temperature dependencies (macromolecular rate theory; MMRT) has emerged as a powerful tool to study the relationship between enzyme turnover and thermodynamics. Using WGMs, SM enzyme measurements enable us to accurately track turnover as a function of conformational changes and therefore to quantitatively probe the key feature of the MMRT model, the activation heat capacity, at the ultimate level of SM. Our data shows that WGMs are extraordinarily sensitive to protein conformational change and can discern both multiple steps with turnover as well as microscopic conformational substates within those steps. The temperature dependence studies show that the MMRT model can be applied to a range of steps within turnover at the SM scale that is associated with conformational change. Our study validates the notion that MMRT captures differences in dynamics between states. The WGM sensors provide a platform for the quantitative analysis of SM activation heat capacity, applying MMRT to the label-free sensing of microsecond substates of active enzymes. American Chemical Society 2021-03-29 2021-05-28 /pmc/articles/PMC8165693/ /pubmed/34085031 http://dx.doi.org/10.1021/acsanm.1c00176 Text en © 2021 The Authors. Published by American Chemical Society Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Subramanian, Sivaraman
Jones, Hannah B.L.
Frustaci, Simona
Winter, Samuel
van der Kamp, Marc W.
Arcus, Vickery L.
Pudney, Christopher R.
Vollmer, Frank
Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes
title Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes
title_full Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes
title_fullStr Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes
title_full_unstemmed Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes
title_short Sensing Enzyme Activation Heat Capacity at the Single-Molecule Level Using Gold-Nanorod-Based Optical Whispering Gallery Modes
title_sort sensing enzyme activation heat capacity at the single-molecule level using gold-nanorod-based optical whispering gallery modes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8165693/
https://www.ncbi.nlm.nih.gov/pubmed/34085031
http://dx.doi.org/10.1021/acsanm.1c00176
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