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“Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging

PURPOSE: With the recent development of deep learning technologies, various neural networks have been proposed for fundus retinal vessel segmentation. Among them, the U-Net is regarded as one of the most successful architectures. In this work, we start with simplification of the U-Net, and explore t...

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Autores principales: Fu, Weilin, Breininger, Katharina, Schaffert, Roman, Pan, Zhaoya, Maier, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8166700/
https://www.ncbi.nlm.nih.gov/pubmed/33929676
http://dx.doi.org/10.1007/s11548-021-02340-1
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author Fu, Weilin
Breininger, Katharina
Schaffert, Roman
Pan, Zhaoya
Maier, Andreas
author_facet Fu, Weilin
Breininger, Katharina
Schaffert, Roman
Pan, Zhaoya
Maier, Andreas
author_sort Fu, Weilin
collection PubMed
description PURPOSE: With the recent development of deep learning technologies, various neural networks have been proposed for fundus retinal vessel segmentation. Among them, the U-Net is regarded as one of the most successful architectures. In this work, we start with simplification of the U-Net, and explore the performance of few-parameter networks on this task. METHODS: We firstly modify the model with popular functional blocks and additional resolution levels, then we switch to exploring the limits for compression of the network architecture. Experiments are designed to simplify the network structure, decrease the number of trainable parameters, and reduce the amount of training data. Performance evaluation is carried out on four public databases, namely DRIVE, STARE, HRF and CHASE_DB1. In addition, the generalization ability of the few-parameter networks are compared against the state-of-the-art segmentation network. RESULTS: We demonstrate that the additive variants do not significantly improve the segmentation performance. The performance of the models are not severely harmed unless they are harshly degenerated: one level, or one filter in the input convolutional layer, or trained with one image. We also demonstrate that few-parameter networks have strong generalization ability. CONCLUSION: It is counter-intuitive that the U-Net produces reasonably good segmentation predictions until reaching the mentioned limits. Our work has two main contributions. On the one hand, the importance of different elements of the U-Net is evaluated, and the minimal U-Net which is capable of the task is presented. On the other hand, our work demonstrates that retinal vessel segmentation can be tackled by surprisingly simple configurations of U-Net reaching almost state-of-the-art performance. We also show that the simple configurations have better generalization ability than state-of-the-art models with high model complexity. These observations seem to be in contradiction to the current trend of continued increase in model complexity and capacity for the task under consideration. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11548-021-02340-1.
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spelling pubmed-81667002021-06-03 “Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging Fu, Weilin Breininger, Katharina Schaffert, Roman Pan, Zhaoya Maier, Andreas Int J Comput Assist Radiol Surg Original Article PURPOSE: With the recent development of deep learning technologies, various neural networks have been proposed for fundus retinal vessel segmentation. Among them, the U-Net is regarded as one of the most successful architectures. In this work, we start with simplification of the U-Net, and explore the performance of few-parameter networks on this task. METHODS: We firstly modify the model with popular functional blocks and additional resolution levels, then we switch to exploring the limits for compression of the network architecture. Experiments are designed to simplify the network structure, decrease the number of trainable parameters, and reduce the amount of training data. Performance evaluation is carried out on four public databases, namely DRIVE, STARE, HRF and CHASE_DB1. In addition, the generalization ability of the few-parameter networks are compared against the state-of-the-art segmentation network. RESULTS: We demonstrate that the additive variants do not significantly improve the segmentation performance. The performance of the models are not severely harmed unless they are harshly degenerated: one level, or one filter in the input convolutional layer, or trained with one image. We also demonstrate that few-parameter networks have strong generalization ability. CONCLUSION: It is counter-intuitive that the U-Net produces reasonably good segmentation predictions until reaching the mentioned limits. Our work has two main contributions. On the one hand, the importance of different elements of the U-Net is evaluated, and the minimal U-Net which is capable of the task is presented. On the other hand, our work demonstrates that retinal vessel segmentation can be tackled by surprisingly simple configurations of U-Net reaching almost state-of-the-art performance. We also show that the simple configurations have better generalization ability than state-of-the-art models with high model complexity. These observations seem to be in contradiction to the current trend of continued increase in model complexity and capacity for the task under consideration. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11548-021-02340-1. Springer International Publishing 2021-04-30 2021 /pmc/articles/PMC8166700/ /pubmed/33929676 http://dx.doi.org/10.1007/s11548-021-02340-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Fu, Weilin
Breininger, Katharina
Schaffert, Roman
Pan, Zhaoya
Maier, Andreas
“Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging
title “Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging
title_full “Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging
title_fullStr “Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging
title_full_unstemmed “Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging
title_short “Keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging
title_sort “keep it simple, scholar”: an experimental analysis of few-parameter segmentation networks for retinal vessels in fundus imaging
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8166700/
https://www.ncbi.nlm.nih.gov/pubmed/33929676
http://dx.doi.org/10.1007/s11548-021-02340-1
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