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Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums

Photoacoustic tomography (PAT) is a non-invasive, high-resolution imaging modality, capable of providing functional and molecular information of various pathologies, such as cancer. One limitation of PAT is the depth and wavelength dependent optical fluence, which results in reduced PA signal amplit...

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Autores principales: Pattyn, Alexander, Mumm, Zackary, Alijabbari, Naser, Duric, Neb, Anastasio, Mark A., Mehrmohammadi, Mohammad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8167150/
https://www.ncbi.nlm.nih.gov/pubmed/34094852
http://dx.doi.org/10.1016/j.pacs.2021.100275
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author Pattyn, Alexander
Mumm, Zackary
Alijabbari, Naser
Duric, Neb
Anastasio, Mark A.
Mehrmohammadi, Mohammad
author_facet Pattyn, Alexander
Mumm, Zackary
Alijabbari, Naser
Duric, Neb
Anastasio, Mark A.
Mehrmohammadi, Mohammad
author_sort Pattyn, Alexander
collection PubMed
description Photoacoustic tomography (PAT) is a non-invasive, high-resolution imaging modality, capable of providing functional and molecular information of various pathologies, such as cancer. One limitation of PAT is the depth and wavelength dependent optical fluence, which results in reduced PA signal amplitude from deeper tissue regions. These factors can therefore introduce errors into quantitative measurements such as oxygen saturation (sO(2)) or the localization and concentration of various chromophores. The variation in the speed-of-sound between different tissues can also lead to distortions in object location and shape. Compensating for these effects allows PAT to be used more quantitatively. We have developed a proof-of-concept algorithm capable of compensating for the heterogeneity in speed-of-sound and depth dependent optical fluence. Speed-of-sound correction was done by using a straight ray-based algorithm for calculating the family of iso-time-of-flight contours between the transducers and every pixel in the imaging grid, while fluence compensation was done by utilizing the graphics processing unit (GPU) accelerated software MCXCL for Monte Carlo modeling of optical fluence variation. This algorithm was tested on a polyvinyl chloride plastisol (PVCP) phantom, which contained cyst mimics and blood inclusions to test the algorithm under relatively heterogeneous conditions. Our results indicate that our PAT algorithm can compensate for the speed-of-sound variation and depth dependent fluence effects within a heterogeneous phantom. The results of this study will pave the way for further development and evaluation of the proposed method in more complex in-vitro and ex-vivo phantoms, as well as compensating for the wavelength-dependent optical fluence in spectroscopic PAT.
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spelling pubmed-81671502021-06-05 Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums Pattyn, Alexander Mumm, Zackary Alijabbari, Naser Duric, Neb Anastasio, Mark A. Mehrmohammadi, Mohammad Photoacoustics Research Article Photoacoustic tomography (PAT) is a non-invasive, high-resolution imaging modality, capable of providing functional and molecular information of various pathologies, such as cancer. One limitation of PAT is the depth and wavelength dependent optical fluence, which results in reduced PA signal amplitude from deeper tissue regions. These factors can therefore introduce errors into quantitative measurements such as oxygen saturation (sO(2)) or the localization and concentration of various chromophores. The variation in the speed-of-sound between different tissues can also lead to distortions in object location and shape. Compensating for these effects allows PAT to be used more quantitatively. We have developed a proof-of-concept algorithm capable of compensating for the heterogeneity in speed-of-sound and depth dependent optical fluence. Speed-of-sound correction was done by using a straight ray-based algorithm for calculating the family of iso-time-of-flight contours between the transducers and every pixel in the imaging grid, while fluence compensation was done by utilizing the graphics processing unit (GPU) accelerated software MCXCL for Monte Carlo modeling of optical fluence variation. This algorithm was tested on a polyvinyl chloride plastisol (PVCP) phantom, which contained cyst mimics and blood inclusions to test the algorithm under relatively heterogeneous conditions. Our results indicate that our PAT algorithm can compensate for the speed-of-sound variation and depth dependent fluence effects within a heterogeneous phantom. The results of this study will pave the way for further development and evaluation of the proposed method in more complex in-vitro and ex-vivo phantoms, as well as compensating for the wavelength-dependent optical fluence in spectroscopic PAT. Elsevier 2021-05-19 /pmc/articles/PMC8167150/ /pubmed/34094852 http://dx.doi.org/10.1016/j.pacs.2021.100275 Text en © 2021 Published by Elsevier GmbH. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Pattyn, Alexander
Mumm, Zackary
Alijabbari, Naser
Duric, Neb
Anastasio, Mark A.
Mehrmohammadi, Mohammad
Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums
title Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums
title_full Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums
title_fullStr Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums
title_full_unstemmed Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums
title_short Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums
title_sort model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8167150/
https://www.ncbi.nlm.nih.gov/pubmed/34094852
http://dx.doi.org/10.1016/j.pacs.2021.100275
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