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The Protein Interactome of Glycolysis in Escherichia coli
Glycolysis is regulated by numerous mechanisms including allosteric regulation, post-translational modification or protein-protein interactions (PPI). While glycolytic enzymes have been found to interact with hundreds of proteins, the impact of only some of these PPIs on glycolysis is well understoo...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8167557/ https://www.ncbi.nlm.nih.gov/pubmed/33917325 http://dx.doi.org/10.3390/proteomes9020016 |
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author | Chowdhury, Shomeek Hepper, Stephen Lodi, Mudassir K. Saier, Milton H. Uetz, Peter |
author_facet | Chowdhury, Shomeek Hepper, Stephen Lodi, Mudassir K. Saier, Milton H. Uetz, Peter |
author_sort | Chowdhury, Shomeek |
collection | PubMed |
description | Glycolysis is regulated by numerous mechanisms including allosteric regulation, post-translational modification or protein-protein interactions (PPI). While glycolytic enzymes have been found to interact with hundreds of proteins, the impact of only some of these PPIs on glycolysis is well understood. Here we investigate which of these interactions may affect glycolysis in E. coli and possibly across numerous other bacteria, based on the stoichiometry of interacting protein pairs (from proteomic studies) and their conservation across bacteria. We present a list of 339 protein-protein interactions involving glycolytic enzymes but predict that ~70% of glycolytic interactors are not present in adequate amounts to have a significant impact on glycolysis. Finally, we identify a conserved but uncharacterized subset of interactions that are likely to affect glycolysis and deserve further study. |
format | Online Article Text |
id | pubmed-8167557 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-81675572021-06-02 The Protein Interactome of Glycolysis in Escherichia coli Chowdhury, Shomeek Hepper, Stephen Lodi, Mudassir K. Saier, Milton H. Uetz, Peter Proteomes Article Glycolysis is regulated by numerous mechanisms including allosteric regulation, post-translational modification or protein-protein interactions (PPI). While glycolytic enzymes have been found to interact with hundreds of proteins, the impact of only some of these PPIs on glycolysis is well understood. Here we investigate which of these interactions may affect glycolysis in E. coli and possibly across numerous other bacteria, based on the stoichiometry of interacting protein pairs (from proteomic studies) and their conservation across bacteria. We present a list of 339 protein-protein interactions involving glycolytic enzymes but predict that ~70% of glycolytic interactors are not present in adequate amounts to have a significant impact on glycolysis. Finally, we identify a conserved but uncharacterized subset of interactions that are likely to affect glycolysis and deserve further study. MDPI 2021-04-06 /pmc/articles/PMC8167557/ /pubmed/33917325 http://dx.doi.org/10.3390/proteomes9020016 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chowdhury, Shomeek Hepper, Stephen Lodi, Mudassir K. Saier, Milton H. Uetz, Peter The Protein Interactome of Glycolysis in Escherichia coli |
title | The Protein Interactome of Glycolysis in Escherichia coli |
title_full | The Protein Interactome of Glycolysis in Escherichia coli |
title_fullStr | The Protein Interactome of Glycolysis in Escherichia coli |
title_full_unstemmed | The Protein Interactome of Glycolysis in Escherichia coli |
title_short | The Protein Interactome of Glycolysis in Escherichia coli |
title_sort | protein interactome of glycolysis in escherichia coli |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8167557/ https://www.ncbi.nlm.nih.gov/pubmed/33917325 http://dx.doi.org/10.3390/proteomes9020016 |
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