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The Protein Interactome of Glycolysis in Escherichia coli

Glycolysis is regulated by numerous mechanisms including allosteric regulation, post-translational modification or protein-protein interactions (PPI). While glycolytic enzymes have been found to interact with hundreds of proteins, the impact of only some of these PPIs on glycolysis is well understoo...

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Autores principales: Chowdhury, Shomeek, Hepper, Stephen, Lodi, Mudassir K., Saier, Milton H., Uetz, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8167557/
https://www.ncbi.nlm.nih.gov/pubmed/33917325
http://dx.doi.org/10.3390/proteomes9020016
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author Chowdhury, Shomeek
Hepper, Stephen
Lodi, Mudassir K.
Saier, Milton H.
Uetz, Peter
author_facet Chowdhury, Shomeek
Hepper, Stephen
Lodi, Mudassir K.
Saier, Milton H.
Uetz, Peter
author_sort Chowdhury, Shomeek
collection PubMed
description Glycolysis is regulated by numerous mechanisms including allosteric regulation, post-translational modification or protein-protein interactions (PPI). While glycolytic enzymes have been found to interact with hundreds of proteins, the impact of only some of these PPIs on glycolysis is well understood. Here we investigate which of these interactions may affect glycolysis in E. coli and possibly across numerous other bacteria, based on the stoichiometry of interacting protein pairs (from proteomic studies) and their conservation across bacteria. We present a list of 339 protein-protein interactions involving glycolytic enzymes but predict that ~70% of glycolytic interactors are not present in adequate amounts to have a significant impact on glycolysis. Finally, we identify a conserved but uncharacterized subset of interactions that are likely to affect glycolysis and deserve further study.
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spelling pubmed-81675572021-06-02 The Protein Interactome of Glycolysis in Escherichia coli Chowdhury, Shomeek Hepper, Stephen Lodi, Mudassir K. Saier, Milton H. Uetz, Peter Proteomes Article Glycolysis is regulated by numerous mechanisms including allosteric regulation, post-translational modification or protein-protein interactions (PPI). While glycolytic enzymes have been found to interact with hundreds of proteins, the impact of only some of these PPIs on glycolysis is well understood. Here we investigate which of these interactions may affect glycolysis in E. coli and possibly across numerous other bacteria, based on the stoichiometry of interacting protein pairs (from proteomic studies) and their conservation across bacteria. We present a list of 339 protein-protein interactions involving glycolytic enzymes but predict that ~70% of glycolytic interactors are not present in adequate amounts to have a significant impact on glycolysis. Finally, we identify a conserved but uncharacterized subset of interactions that are likely to affect glycolysis and deserve further study. MDPI 2021-04-06 /pmc/articles/PMC8167557/ /pubmed/33917325 http://dx.doi.org/10.3390/proteomes9020016 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chowdhury, Shomeek
Hepper, Stephen
Lodi, Mudassir K.
Saier, Milton H.
Uetz, Peter
The Protein Interactome of Glycolysis in Escherichia coli
title The Protein Interactome of Glycolysis in Escherichia coli
title_full The Protein Interactome of Glycolysis in Escherichia coli
title_fullStr The Protein Interactome of Glycolysis in Escherichia coli
title_full_unstemmed The Protein Interactome of Glycolysis in Escherichia coli
title_short The Protein Interactome of Glycolysis in Escherichia coli
title_sort protein interactome of glycolysis in escherichia coli
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8167557/
https://www.ncbi.nlm.nih.gov/pubmed/33917325
http://dx.doi.org/10.3390/proteomes9020016
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