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Complete chloroplast genome sequence of Convolvulus arvensis

The complete chloroplast genome of Convolvulus arvensis was reconstructed by reference-based assembly using Illumina paired-end data. The assembled plastome is 153,234 base pairs (bp) in length, including a pair of inverted repeat regions (IRs) of 22,662 bp each, a large single-copy region (LSC) of...

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Autores principales: Wang, Zhiqiang, Song, Hui, Jiang, Dechun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168749/
https://www.ncbi.nlm.nih.gov/pubmed/34104779
http://dx.doi.org/10.1080/23802359.2021.1915202
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author Wang, Zhiqiang
Song, Hui
Jiang, Dechun
author_facet Wang, Zhiqiang
Song, Hui
Jiang, Dechun
author_sort Wang, Zhiqiang
collection PubMed
description The complete chloroplast genome of Convolvulus arvensis was reconstructed by reference-based assembly using Illumina paired-end data. The assembled plastome is 153,234 base pairs (bp) in length, including a pair of inverted repeat regions (IRs) of 22,662 bp each, a large single-copy region (LSC) of 89,059 bp and a small single-copy region (SSC) of 19,651 bp. A total of 115 genes were predicted from the chloroplast genome, including 74 protein coding genes, 37 tRNA genes and 4 rRNA genes. The overall GC content of C. arvensis chloroplast genome was 37.7%. Phylogenetic analysis with several reported chloroplast genomes showed that C. arvensis is closely clustered with Operculina macrocarpa. The complete chloroplast genome of C. arvensis provides new insight into the evolutionary and genomic studies of Convolvulaceae.
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spelling pubmed-81687492021-06-07 Complete chloroplast genome sequence of Convolvulus arvensis Wang, Zhiqiang Song, Hui Jiang, Dechun Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Convolvulus arvensis was reconstructed by reference-based assembly using Illumina paired-end data. The assembled plastome is 153,234 base pairs (bp) in length, including a pair of inverted repeat regions (IRs) of 22,662 bp each, a large single-copy region (LSC) of 89,059 bp and a small single-copy region (SSC) of 19,651 bp. A total of 115 genes were predicted from the chloroplast genome, including 74 protein coding genes, 37 tRNA genes and 4 rRNA genes. The overall GC content of C. arvensis chloroplast genome was 37.7%. Phylogenetic analysis with several reported chloroplast genomes showed that C. arvensis is closely clustered with Operculina macrocarpa. The complete chloroplast genome of C. arvensis provides new insight into the evolutionary and genomic studies of Convolvulaceae. Taylor & Francis 2021-05-31 /pmc/articles/PMC8168749/ /pubmed/34104779 http://dx.doi.org/10.1080/23802359.2021.1915202 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Zhiqiang
Song, Hui
Jiang, Dechun
Complete chloroplast genome sequence of Convolvulus arvensis
title Complete chloroplast genome sequence of Convolvulus arvensis
title_full Complete chloroplast genome sequence of Convolvulus arvensis
title_fullStr Complete chloroplast genome sequence of Convolvulus arvensis
title_full_unstemmed Complete chloroplast genome sequence of Convolvulus arvensis
title_short Complete chloroplast genome sequence of Convolvulus arvensis
title_sort complete chloroplast genome sequence of convolvulus arvensis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168749/
https://www.ncbi.nlm.nih.gov/pubmed/34104779
http://dx.doi.org/10.1080/23802359.2021.1915202
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