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The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China
Passiflora xishuangbannaensis, Passiflora subgenus Decaloba, is a very rare endemic to the Yunnan, China. Here we report and characterize the complete chloroplast (cp) genome sequence of P. xishuangbannaensis to provide genomic resources useful for promoting its conservation and systematics. The com...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168759/ https://www.ncbi.nlm.nih.gov/pubmed/34104766 http://dx.doi.org/10.1080/23802359.2021.1928562 |
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author | Hao, Chunhui Wu, Fuchuan |
author_facet | Hao, Chunhui Wu, Fuchuan |
author_sort | Hao, Chunhui |
collection | PubMed |
description | Passiflora xishuangbannaensis, Passiflora subgenus Decaloba, is a very rare endemic to the Yunnan, China. Here we report and characterize the complete chloroplast (cp) genome sequence of P. xishuangbannaensis to provide genomic resources useful for promoting its conservation and systematics. The complete genome is 135,742 bp in length and the overall GC content is 37.1%. The cp genome sequence has a typical quadripartite structure, comprising two inverted repeats (IRs: 20,604 bp) regions, which are separated by a small single-copy (SSC: 13,159 bp) region and a large single-copy (LSC: 81,375 bp) region. Moreover, a total of 122 functional genes were annotated, including 77 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis recovered P. xishuangbannaensis as a member of subgenus Decaloba. |
format | Online Article Text |
id | pubmed-8168759 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-81687592021-06-07 The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China Hao, Chunhui Wu, Fuchuan Mitochondrial DNA B Resour Mitogenome Announcement Passiflora xishuangbannaensis, Passiflora subgenus Decaloba, is a very rare endemic to the Yunnan, China. Here we report and characterize the complete chloroplast (cp) genome sequence of P. xishuangbannaensis to provide genomic resources useful for promoting its conservation and systematics. The complete genome is 135,742 bp in length and the overall GC content is 37.1%. The cp genome sequence has a typical quadripartite structure, comprising two inverted repeats (IRs: 20,604 bp) regions, which are separated by a small single-copy (SSC: 13,159 bp) region and a large single-copy (LSC: 81,375 bp) region. Moreover, a total of 122 functional genes were annotated, including 77 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis recovered P. xishuangbannaensis as a member of subgenus Decaloba. Taylor & Francis 2021-05-27 /pmc/articles/PMC8168759/ /pubmed/34104766 http://dx.doi.org/10.1080/23802359.2021.1928562 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Hao, Chunhui Wu, Fuchuan The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China |
title | The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China |
title_full | The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China |
title_fullStr | The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China |
title_full_unstemmed | The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China |
title_short | The complete chloroplast genome sequence of Passiflora xishuangbannaensis (Passifloraceae), a vine endemic to Yunnan, China |
title_sort | complete chloroplast genome sequence of passiflora xishuangbannaensis (passifloraceae), a vine endemic to yunnan, china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168759/ https://www.ncbi.nlm.nih.gov/pubmed/34104766 http://dx.doi.org/10.1080/23802359.2021.1928562 |
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