The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae)

Thyrsostachys is oligotypic genus of Bambusinae, while its phylogenetic position had been unclear. Here, the complete plastid genome of the type species, T. siamensis, was sequenced and analyzed in this work. The complete genome is a typical quadripartite structure with 139,522 bp in length, compris...

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Autores principales: Tang, Shu-Ling, Xie, Jian-Hua, Cai, Jia-Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168764/
https://www.ncbi.nlm.nih.gov/pubmed/34104773
http://dx.doi.org/10.1080/23802359.2021.1934138
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author Tang, Shu-Ling
Xie, Jian-Hua
Cai, Jia-Zhen
author_facet Tang, Shu-Ling
Xie, Jian-Hua
Cai, Jia-Zhen
author_sort Tang, Shu-Ling
collection PubMed
description Thyrsostachys is oligotypic genus of Bambusinae, while its phylogenetic position had been unclear. Here, the complete plastid genome of the type species, T. siamensis, was sequenced and analyzed in this work. The complete genome is a typical quadripartite structure with 139,522 bp in length, comprising of a large single-copy region (LSC, 83,032 bp), a small single-copy region (SSC, 12,892 bp), and a pair of invert repeats regions (IR, 21,799 bp). The genome contains 138 genes, 89 protein-coding genes, 41 tRNA genes, and 8 rRNA genes. The GC content of genome was 38.9%. Phylogenetic analysis indicated T. siamensis was sister to Dendrocalamus birmanicus within Bambusinae.
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spelling pubmed-81687642021-06-07 The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae) Tang, Shu-Ling Xie, Jian-Hua Cai, Jia-Zhen Mitochondrial DNA B Resour Mitogenome Announcement Thyrsostachys is oligotypic genus of Bambusinae, while its phylogenetic position had been unclear. Here, the complete plastid genome of the type species, T. siamensis, was sequenced and analyzed in this work. The complete genome is a typical quadripartite structure with 139,522 bp in length, comprising of a large single-copy region (LSC, 83,032 bp), a small single-copy region (SSC, 12,892 bp), and a pair of invert repeats regions (IR, 21,799 bp). The genome contains 138 genes, 89 protein-coding genes, 41 tRNA genes, and 8 rRNA genes. The GC content of genome was 38.9%. Phylogenetic analysis indicated T. siamensis was sister to Dendrocalamus birmanicus within Bambusinae. Taylor & Francis 2021-05-27 /pmc/articles/PMC8168764/ /pubmed/34104773 http://dx.doi.org/10.1080/23802359.2021.1934138 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tang, Shu-Ling
Xie, Jian-Hua
Cai, Jia-Zhen
The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae)
title The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae)
title_full The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae)
title_fullStr The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae)
title_full_unstemmed The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae)
title_short The complete plastid genome of Thyrsostachys siamensis (Poaceae, Bambusoideae)
title_sort complete plastid genome of thyrsostachys siamensis (poaceae, bambusoideae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168764/
https://www.ncbi.nlm.nih.gov/pubmed/34104773
http://dx.doi.org/10.1080/23802359.2021.1934138
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