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Chloroplast genome and phylogenetic analysis of Grewia biloba
Grewia biloba is a potential medicinal and ornamental resource, and this study is the first to assemble the chloroplast genome of this species using high-throughput sequencing data. The chloroplast genome of G. biloba has a typical composition for higher plant chloroplasts, containing one large sing...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168777/ https://www.ncbi.nlm.nih.gov/pubmed/34104770 http://dx.doi.org/10.1080/23802359.2021.1932626 |
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author | Xu, Dongya Liu, Meng Ren, Haozhan Zhang, Bin Liu, Zongcai Wang, Hongwei |
author_facet | Xu, Dongya Liu, Meng Ren, Haozhan Zhang, Bin Liu, Zongcai Wang, Hongwei |
author_sort | Xu, Dongya |
collection | PubMed |
description | Grewia biloba is a potential medicinal and ornamental resource, and this study is the first to assemble the chloroplast genome of this species using high-throughput sequencing data. The chloroplast genome of G. biloba has a typical composition for higher plant chloroplasts, containing one large single-copy region of 86,978 bp and one small single-copy region of 20,140 bp, which are separated by a pair of inverted-repeat regions of 25,473 bp. The chloroplast genome of this species encodes 130 genes, including 84 protein-coding genes, 38 tRNA genes and 8 rRNA genes. A maximum-likelihood phylogenetic tree was constructed based on sequence information of the chloroplast genomes. The chloroplast genome of G. biloba will provide valuable genetic information for evolutionary research and utilization of this species. |
format | Online Article Text |
id | pubmed-8168777 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-81687772021-06-07 Chloroplast genome and phylogenetic analysis of Grewia biloba Xu, Dongya Liu, Meng Ren, Haozhan Zhang, Bin Liu, Zongcai Wang, Hongwei Mitochondrial DNA B Resour Mitogenome Announcement Grewia biloba is a potential medicinal and ornamental resource, and this study is the first to assemble the chloroplast genome of this species using high-throughput sequencing data. The chloroplast genome of G. biloba has a typical composition for higher plant chloroplasts, containing one large single-copy region of 86,978 bp and one small single-copy region of 20,140 bp, which are separated by a pair of inverted-repeat regions of 25,473 bp. The chloroplast genome of this species encodes 130 genes, including 84 protein-coding genes, 38 tRNA genes and 8 rRNA genes. A maximum-likelihood phylogenetic tree was constructed based on sequence information of the chloroplast genomes. The chloroplast genome of G. biloba will provide valuable genetic information for evolutionary research and utilization of this species. Taylor & Francis 2021-05-27 /pmc/articles/PMC8168777/ /pubmed/34104770 http://dx.doi.org/10.1080/23802359.2021.1932626 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xu, Dongya Liu, Meng Ren, Haozhan Zhang, Bin Liu, Zongcai Wang, Hongwei Chloroplast genome and phylogenetic analysis of Grewia biloba |
title | Chloroplast genome and phylogenetic analysis of Grewia biloba |
title_full | Chloroplast genome and phylogenetic analysis of Grewia biloba |
title_fullStr | Chloroplast genome and phylogenetic analysis of Grewia biloba |
title_full_unstemmed | Chloroplast genome and phylogenetic analysis of Grewia biloba |
title_short | Chloroplast genome and phylogenetic analysis of Grewia biloba |
title_sort | chloroplast genome and phylogenetic analysis of grewia biloba |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8168777/ https://www.ncbi.nlm.nih.gov/pubmed/34104770 http://dx.doi.org/10.1080/23802359.2021.1932626 |
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