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Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset

The prediction of hospital patients and outpatients with suspected arboviral infection individuals in research-limited settings of the urban areas is defined as a challenging process for clinicians. Dengue, Chikungunya, and Zika arboviruses have gained attention in recent years because of the high p...

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Autores principales: Ozer, Ilyas, Cetin, Onursal, Gorur, Kutlucan, Temurtas, Feyzullah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer London 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8169423/
https://www.ncbi.nlm.nih.gov/pubmed/34092929
http://dx.doi.org/10.1007/s00521-021-06133-0
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author Ozer, Ilyas
Cetin, Onursal
Gorur, Kutlucan
Temurtas, Feyzullah
author_facet Ozer, Ilyas
Cetin, Onursal
Gorur, Kutlucan
Temurtas, Feyzullah
author_sort Ozer, Ilyas
collection PubMed
description The prediction of hospital patients and outpatients with suspected arboviral infection individuals in research-limited settings of the urban areas is defined as a challenging process for clinicians. Dengue, Chikungunya, and Zika arboviruses have gained attention in recent years because of the high prevalence in the society and financial burden of major global health systems. In this study, we proposed a machine learning algorithm based prediction model over retrospective medical records, which are named as SISA (the Severity Index for Suspected Arbovirus) and SISAL (the Severity Index for Suspected Arbovirus with Laboratory) datasets. Therefore, we aim to inform the clinicians about the use of machine learning with transfer learning success for diagnosis and comprehensive comparison of the classification performances over the SISA/SISAL datasets in the resource-limited settings that may cause to the small datasets of arboviral infection. In this study, Convolutional Neural Network and Long Short-Term Memory have achieved 100% accuracy and 1 of area under the curve (AUC) score, Fully Connected Deep Network has provided 92.86% accuracy and 0.969 AUC score in the SISAL dataset with transfer learning. Moreover, 98.73% accuracy and 0.988 AUC score were obtained by Convolutional Neural Network and Long Short-Term Memory for the SISA dataset. Furthermore, Linear Discriminant Analysis (shallow algorithm) has provided reaching up to 96.43% accuracy. Notably, deep learning based models have achieved improved performances compared to the previously reported study.
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spelling pubmed-81694232021-06-02 Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset Ozer, Ilyas Cetin, Onursal Gorur, Kutlucan Temurtas, Feyzullah Neural Comput Appl Original Article The prediction of hospital patients and outpatients with suspected arboviral infection individuals in research-limited settings of the urban areas is defined as a challenging process for clinicians. Dengue, Chikungunya, and Zika arboviruses have gained attention in recent years because of the high prevalence in the society and financial burden of major global health systems. In this study, we proposed a machine learning algorithm based prediction model over retrospective medical records, which are named as SISA (the Severity Index for Suspected Arbovirus) and SISAL (the Severity Index for Suspected Arbovirus with Laboratory) datasets. Therefore, we aim to inform the clinicians about the use of machine learning with transfer learning success for diagnosis and comprehensive comparison of the classification performances over the SISA/SISAL datasets in the resource-limited settings that may cause to the small datasets of arboviral infection. In this study, Convolutional Neural Network and Long Short-Term Memory have achieved 100% accuracy and 1 of area under the curve (AUC) score, Fully Connected Deep Network has provided 92.86% accuracy and 0.969 AUC score in the SISAL dataset with transfer learning. Moreover, 98.73% accuracy and 0.988 AUC score were obtained by Convolutional Neural Network and Long Short-Term Memory for the SISA dataset. Furthermore, Linear Discriminant Analysis (shallow algorithm) has provided reaching up to 96.43% accuracy. Notably, deep learning based models have achieved improved performances compared to the previously reported study. Springer London 2021-06-01 2021 /pmc/articles/PMC8169423/ /pubmed/34092929 http://dx.doi.org/10.1007/s00521-021-06133-0 Text en © The Author(s), under exclusive licence to Springer-Verlag London Ltd., part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Ozer, Ilyas
Cetin, Onursal
Gorur, Kutlucan
Temurtas, Feyzullah
Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset
title Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset
title_full Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset
title_fullStr Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset
title_full_unstemmed Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset
title_short Improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset
title_sort improved machine learning performances with transfer learning to predicting need for hospitalization in arboviral infections against the small dataset
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8169423/
https://www.ncbi.nlm.nih.gov/pubmed/34092929
http://dx.doi.org/10.1007/s00521-021-06133-0
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