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Scaling relation between genome length and particle size of viruses provides insights into viral life history

In terms of genome and particle sizes, viruses exhibit great diversity. With the discovery of several nucleocytoplasmic large DNA viruses (NCLDVs) and jumbo phages, the relationship between particle and genome sizes has emerged as an important criterion for understanding virus evolution. We use allo...

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Autores principales: Chaudhari, Harshali V., Inamdar, Mandar M., Kondabagil, Kiran
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8169800/
https://www.ncbi.nlm.nih.gov/pubmed/34113814
http://dx.doi.org/10.1016/j.isci.2021.102452
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author Chaudhari, Harshali V.
Inamdar, Mandar M.
Kondabagil, Kiran
author_facet Chaudhari, Harshali V.
Inamdar, Mandar M.
Kondabagil, Kiran
author_sort Chaudhari, Harshali V.
collection PubMed
description In terms of genome and particle sizes, viruses exhibit great diversity. With the discovery of several nucleocytoplasmic large DNA viruses (NCLDVs) and jumbo phages, the relationship between particle and genome sizes has emerged as an important criterion for understanding virus evolution. We use allometric scaling of capsid volume with the genome length of different groups of viruses to shed light on its relationship with virus life history. The allometric exponents for icosahedral dsDNA bacteriophages and NCDLVs were found to be 1 and 2, respectively, indicating that with increasing capsid size DNA packaging density remains the same in bacteriophages but decreases for NCLDVs. We argue that the exponents are largely shaped by their entry mechanism and capsid mechanical stability. We further show that these allometric size parameters are also intricately linked to the relative energy costs of translation and replication in viruses and can have further implications on viral life history.
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spelling pubmed-81698002021-06-09 Scaling relation between genome length and particle size of viruses provides insights into viral life history Chaudhari, Harshali V. Inamdar, Mandar M. Kondabagil, Kiran iScience Article In terms of genome and particle sizes, viruses exhibit great diversity. With the discovery of several nucleocytoplasmic large DNA viruses (NCLDVs) and jumbo phages, the relationship between particle and genome sizes has emerged as an important criterion for understanding virus evolution. We use allometric scaling of capsid volume with the genome length of different groups of viruses to shed light on its relationship with virus life history. The allometric exponents for icosahedral dsDNA bacteriophages and NCDLVs were found to be 1 and 2, respectively, indicating that with increasing capsid size DNA packaging density remains the same in bacteriophages but decreases for NCLDVs. We argue that the exponents are largely shaped by their entry mechanism and capsid mechanical stability. We further show that these allometric size parameters are also intricately linked to the relative energy costs of translation and replication in viruses and can have further implications on viral life history. Elsevier 2021-04-21 /pmc/articles/PMC8169800/ /pubmed/34113814 http://dx.doi.org/10.1016/j.isci.2021.102452 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chaudhari, Harshali V.
Inamdar, Mandar M.
Kondabagil, Kiran
Scaling relation between genome length and particle size of viruses provides insights into viral life history
title Scaling relation between genome length and particle size of viruses provides insights into viral life history
title_full Scaling relation between genome length and particle size of viruses provides insights into viral life history
title_fullStr Scaling relation between genome length and particle size of viruses provides insights into viral life history
title_full_unstemmed Scaling relation between genome length and particle size of viruses provides insights into viral life history
title_short Scaling relation between genome length and particle size of viruses provides insights into viral life history
title_sort scaling relation between genome length and particle size of viruses provides insights into viral life history
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8169800/
https://www.ncbi.nlm.nih.gov/pubmed/34113814
http://dx.doi.org/10.1016/j.isci.2021.102452
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