Cargando…

UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments

Motivated by the current COVID-19 pandemic, which has spurred a substantial flow of structural data, the use of molecular-visualization experiences to make these data sets accessible to a broad audience is described. Using a variety of technology vectors related to the cloud, 3D and virtual reality...

Descripción completa

Detalles Bibliográficos
Autores principales: Martinez, Xavier, Baaden, Marc
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8171070/
https://www.ncbi.nlm.nih.gov/pubmed/34076589
http://dx.doi.org/10.1107/S2059798321002941
_version_ 1783702359998726144
author Martinez, Xavier
Baaden, Marc
author_facet Martinez, Xavier
Baaden, Marc
author_sort Martinez, Xavier
collection PubMed
description Motivated by the current COVID-19 pandemic, which has spurred a substantial flow of structural data, the use of molecular-visualization experiences to make these data sets accessible to a broad audience is described. Using a variety of technology vectors related to the cloud, 3D and virtual reality gear, how to share curated visualizations of structural biology, modeling and/or bioinformatics data sets for interactive and collaborative exploration is examined. FAIR is discussed as an overarching principle for sharing such visualizations. Four initial example scenes related to recent COVID-19 structural data are provided, together with a ready-to-use (and share) implementation in the UnityMol software.
format Online
Article
Text
id pubmed-8171070
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-81710702021-06-14 UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments Martinez, Xavier Baaden, Marc Acta Crystallogr D Struct Biol Ccp4 Motivated by the current COVID-19 pandemic, which has spurred a substantial flow of structural data, the use of molecular-visualization experiences to make these data sets accessible to a broad audience is described. Using a variety of technology vectors related to the cloud, 3D and virtual reality gear, how to share curated visualizations of structural biology, modeling and/or bioinformatics data sets for interactive and collaborative exploration is examined. FAIR is discussed as an overarching principle for sharing such visualizations. Four initial example scenes related to recent COVID-19 structural data are provided, together with a ready-to-use (and share) implementation in the UnityMol software. International Union of Crystallography 2021-05-28 /pmc/articles/PMC8171070/ /pubmed/34076589 http://dx.doi.org/10.1107/S2059798321002941 Text en © Martinez & Baaden 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Ccp4
Martinez, Xavier
Baaden, Marc
UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments
title UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments
title_full UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments
title_fullStr UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments
title_full_unstemmed UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments
title_short UnityMol prototype for FAIR sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3D environments
title_sort unitymol prototype for fair sharing of molecular-visualization experiences: from pictures in the cloud to collaborative virtual reality exploration in immersive 3d environments
topic Ccp4
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8171070/
https://www.ncbi.nlm.nih.gov/pubmed/34076589
http://dx.doi.org/10.1107/S2059798321002941
work_keys_str_mv AT martinezxavier unitymolprototypeforfairsharingofmolecularvisualizationexperiencesfrompicturesinthecloudtocollaborativevirtualrealityexplorationinimmersive3denvironments
AT baadenmarc unitymolprototypeforfairsharingofmolecularvisualizationexperiencesfrompicturesinthecloudtocollaborativevirtualrealityexplorationinimmersive3denvironments