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Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients
Delirium is a common serious complication that often occurs after major surgery. The goals of this study were to explore the expression profiles and functional networks of long non-coding RNAs (lncRNAs) and mRNAs in patients of postoperative delirium (POD). Microarray analysis was performed on the p...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8171121/ https://www.ncbi.nlm.nih.gov/pubmed/34093168 http://dx.doi.org/10.3389/fnagi.2021.665935 |
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author | Song, Yuxiang Wang, Xiaoyan Hou, Aisheng Li, Hao Lou, Jingsheng Liu, Yanhong Cao, Jiangbei Mi, Weidong |
author_facet | Song, Yuxiang Wang, Xiaoyan Hou, Aisheng Li, Hao Lou, Jingsheng Liu, Yanhong Cao, Jiangbei Mi, Weidong |
author_sort | Song, Yuxiang |
collection | PubMed |
description | Delirium is a common serious complication that often occurs after major surgery. The goals of this study were to explore the expression profiles and functional networks of long non-coding RNAs (lncRNAs) and mRNAs in patients of postoperative delirium (POD). Microarray analysis was performed on the peripheral blood samples to identify differentially expressed (DE) lncRNAs and mRNAs in 4 POD patients and 4 non-POD volunteers. DE lncRNAs and mRNAs were validated by quantitative reverse transcription PCR (RT-qPCR). Bioinformatic analyses were performed to identify the critical biological functions and signaling pathways involved in POD. A total of 1195 DE lncRNAs and 735 DE mRNAs were identified between the POD and non-POD groups. Verified by the RT-qPCR, we identified 14 DE lncRNAs that may relate to the pathogenesis of POD. These 14 DE lncRNAs play important regulatory roles in “glutamate and 5-hydroxytryptamine,” “synaptotagmin 7,” “transient receptor potential channel,” “interleukin-2 production.” There was a regulatory relationship between lncRNA ENST00000530057 and synaptotagmin (Syt) 7 mRNA. The mRNA level of PCLO was up-regulated in POD group. This study showed abundant DE lncRNAs and mRNAs in POD that might help in deciphering the disease pathogenesis. |
format | Online Article Text |
id | pubmed-8171121 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81711212021-06-03 Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients Song, Yuxiang Wang, Xiaoyan Hou, Aisheng Li, Hao Lou, Jingsheng Liu, Yanhong Cao, Jiangbei Mi, Weidong Front Aging Neurosci Neuroscience Delirium is a common serious complication that often occurs after major surgery. The goals of this study were to explore the expression profiles and functional networks of long non-coding RNAs (lncRNAs) and mRNAs in patients of postoperative delirium (POD). Microarray analysis was performed on the peripheral blood samples to identify differentially expressed (DE) lncRNAs and mRNAs in 4 POD patients and 4 non-POD volunteers. DE lncRNAs and mRNAs were validated by quantitative reverse transcription PCR (RT-qPCR). Bioinformatic analyses were performed to identify the critical biological functions and signaling pathways involved in POD. A total of 1195 DE lncRNAs and 735 DE mRNAs were identified between the POD and non-POD groups. Verified by the RT-qPCR, we identified 14 DE lncRNAs that may relate to the pathogenesis of POD. These 14 DE lncRNAs play important regulatory roles in “glutamate and 5-hydroxytryptamine,” “synaptotagmin 7,” “transient receptor potential channel,” “interleukin-2 production.” There was a regulatory relationship between lncRNA ENST00000530057 and synaptotagmin (Syt) 7 mRNA. The mRNA level of PCLO was up-regulated in POD group. This study showed abundant DE lncRNAs and mRNAs in POD that might help in deciphering the disease pathogenesis. Frontiers Media S.A. 2021-05-19 /pmc/articles/PMC8171121/ /pubmed/34093168 http://dx.doi.org/10.3389/fnagi.2021.665935 Text en Copyright © 2021 Song, Wang, Hou, Li, Lou, Liu, Cao and Mi. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Song, Yuxiang Wang, Xiaoyan Hou, Aisheng Li, Hao Lou, Jingsheng Liu, Yanhong Cao, Jiangbei Mi, Weidong Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients |
title | Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients |
title_full | Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients |
title_fullStr | Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients |
title_full_unstemmed | Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients |
title_short | Integrative Analysis of lncRNA and mRNA and Profiles in Postoperative Delirium Patients |
title_sort | integrative analysis of lncrna and mrna and profiles in postoperative delirium patients |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8171121/ https://www.ncbi.nlm.nih.gov/pubmed/34093168 http://dx.doi.org/10.3389/fnagi.2021.665935 |
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