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The non-adiabatic nanoreactor: towards the automated discovery of photochemistry
The ab initio nanoreactor has previously been introduced to automate reaction discovery for ground state chemistry. In this work, we present the nonadiabatic nanoreactor, an analogous framework for excited state reaction discovery. We automate the study of nonadiabatic decay mechanisms of molecules...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8171323/ https://www.ncbi.nlm.nih.gov/pubmed/34163820 http://dx.doi.org/10.1039/d1sc00775k |
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author | Pieri, Elisa Lahana, Dean Chang, Alexander M. Aldaz, Cody R. Thompson, Keiran C. Martínez, Todd J. |
author_facet | Pieri, Elisa Lahana, Dean Chang, Alexander M. Aldaz, Cody R. Thompson, Keiran C. Martínez, Todd J. |
author_sort | Pieri, Elisa |
collection | PubMed |
description | The ab initio nanoreactor has previously been introduced to automate reaction discovery for ground state chemistry. In this work, we present the nonadiabatic nanoreactor, an analogous framework for excited state reaction discovery. We automate the study of nonadiabatic decay mechanisms of molecules by probing the intersection seam between adiabatic electronic states with hyper-real metadynamics, sampling the branching plane for relevant conical intersections, and performing seam-constrained path searches. We illustrate the effectiveness of the nonadiabatic nanoreactor by applying it to benzene, a molecule with rich photochemistry and a wide array of photochemical products. Our study confirms the existence of several types of S(0)/S(1) and S(1)/S(2) conical intersections which mediate access to a variety of ground state stationary points. We elucidate the connections between conical intersection energy/topography and the resulting photoproduct distribution, which changes smoothly along seam space segments. The exploration is performed with minimal user input, and the protocol requires no previous knowledge of the photochemical behavior of a target molecule. We demonstrate that the nonadiabatic nanoreactor is a valuable tool for the automated exploration of photochemical reactions and their mechanisms. |
format | Online Article Text |
id | pubmed-8171323 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-81713232021-06-22 The non-adiabatic nanoreactor: towards the automated discovery of photochemistry Pieri, Elisa Lahana, Dean Chang, Alexander M. Aldaz, Cody R. Thompson, Keiran C. Martínez, Todd J. Chem Sci Chemistry The ab initio nanoreactor has previously been introduced to automate reaction discovery for ground state chemistry. In this work, we present the nonadiabatic nanoreactor, an analogous framework for excited state reaction discovery. We automate the study of nonadiabatic decay mechanisms of molecules by probing the intersection seam between adiabatic electronic states with hyper-real metadynamics, sampling the branching plane for relevant conical intersections, and performing seam-constrained path searches. We illustrate the effectiveness of the nonadiabatic nanoreactor by applying it to benzene, a molecule with rich photochemistry and a wide array of photochemical products. Our study confirms the existence of several types of S(0)/S(1) and S(1)/S(2) conical intersections which mediate access to a variety of ground state stationary points. We elucidate the connections between conical intersection energy/topography and the resulting photoproduct distribution, which changes smoothly along seam space segments. The exploration is performed with minimal user input, and the protocol requires no previous knowledge of the photochemical behavior of a target molecule. We demonstrate that the nonadiabatic nanoreactor is a valuable tool for the automated exploration of photochemical reactions and their mechanisms. The Royal Society of Chemistry 2021-04-29 /pmc/articles/PMC8171323/ /pubmed/34163820 http://dx.doi.org/10.1039/d1sc00775k Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Pieri, Elisa Lahana, Dean Chang, Alexander M. Aldaz, Cody R. Thompson, Keiran C. Martínez, Todd J. The non-adiabatic nanoreactor: towards the automated discovery of photochemistry |
title | The non-adiabatic nanoreactor: towards the automated discovery of photochemistry |
title_full | The non-adiabatic nanoreactor: towards the automated discovery of photochemistry |
title_fullStr | The non-adiabatic nanoreactor: towards the automated discovery of photochemistry |
title_full_unstemmed | The non-adiabatic nanoreactor: towards the automated discovery of photochemistry |
title_short | The non-adiabatic nanoreactor: towards the automated discovery of photochemistry |
title_sort | non-adiabatic nanoreactor: towards the automated discovery of photochemistry |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8171323/ https://www.ncbi.nlm.nih.gov/pubmed/34163820 http://dx.doi.org/10.1039/d1sc00775k |
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