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RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification
In view of the challenges of the group Lasso penalty methods for multicancer microarray data analysis, e.g., dividing genes into groups in advance and biological interpretability, we propose a robust adaptive multinomial regression with sparse group Lasso penalty (RAMRSGL) model. By adopting the ove...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8172296/ https://www.ncbi.nlm.nih.gov/pubmed/34122617 http://dx.doi.org/10.1155/2021/5584684 |
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author | Wang, Lei Li, Juntao Liu, Juanfang Chang, Mingming |
author_facet | Wang, Lei Li, Juntao Liu, Juanfang Chang, Mingming |
author_sort | Wang, Lei |
collection | PubMed |
description | In view of the challenges of the group Lasso penalty methods for multicancer microarray data analysis, e.g., dividing genes into groups in advance and biological interpretability, we propose a robust adaptive multinomial regression with sparse group Lasso penalty (RAMRSGL) model. By adopting the overlapping clustering strategy, affinity propagation clustering is employed to obtain each cancer gene subtype, which explores the group structure of each cancer subtype and merges the groups of all subtypes. In addition, the data-driven weights based on noise are added to the sparse group Lasso penalty, combining with the multinomial log-likelihood function to perform multiclassification and adaptive group gene selection simultaneously. The experimental results on acute leukemia data verify the effectiveness of the proposed method. |
format | Online Article Text |
id | pubmed-8172296 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-81722962021-06-11 RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification Wang, Lei Li, Juntao Liu, Juanfang Chang, Mingming Comput Math Methods Med Research Article In view of the challenges of the group Lasso penalty methods for multicancer microarray data analysis, e.g., dividing genes into groups in advance and biological interpretability, we propose a robust adaptive multinomial regression with sparse group Lasso penalty (RAMRSGL) model. By adopting the overlapping clustering strategy, affinity propagation clustering is employed to obtain each cancer gene subtype, which explores the group structure of each cancer subtype and merges the groups of all subtypes. In addition, the data-driven weights based on noise are added to the sparse group Lasso penalty, combining with the multinomial log-likelihood function to perform multiclassification and adaptive group gene selection simultaneously. The experimental results on acute leukemia data verify the effectiveness of the proposed method. Hindawi 2021-05-25 /pmc/articles/PMC8172296/ /pubmed/34122617 http://dx.doi.org/10.1155/2021/5584684 Text en Copyright © 2021 Lei Wang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Wang, Lei Li, Juntao Liu, Juanfang Chang, Mingming RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification |
title | RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification |
title_full | RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification |
title_fullStr | RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification |
title_full_unstemmed | RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification |
title_short | RAMRSGL: A Robust Adaptive Multinomial Regression Model for Multicancer Classification |
title_sort | ramrsgl: a robust adaptive multinomial regression model for multicancer classification |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8172296/ https://www.ncbi.nlm.nih.gov/pubmed/34122617 http://dx.doi.org/10.1155/2021/5584684 |
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