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Infection kinetics of Covid-19 and containment strategy
The devastating trail of Covid-19 is characterized by one of the highest mortality-to-infected ratio for a pandemic. Restricted therapeutic and early-stage vaccination still renders social exclusion through lockdown as the key containment mode.To understand the dynamics, we propose PHIRVD, a mechani...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8173017/ https://www.ncbi.nlm.nih.gov/pubmed/34078929 http://dx.doi.org/10.1038/s41598-021-90698-2 |
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author | Chattopadhyay, Amit K Choudhury, Debajyoti Ghosh, Goutam Kundu, Bidisha Nath, Sujit Kumar |
author_facet | Chattopadhyay, Amit K Choudhury, Debajyoti Ghosh, Goutam Kundu, Bidisha Nath, Sujit Kumar |
author_sort | Chattopadhyay, Amit K |
collection | PubMed |
description | The devastating trail of Covid-19 is characterized by one of the highest mortality-to-infected ratio for a pandemic. Restricted therapeutic and early-stage vaccination still renders social exclusion through lockdown as the key containment mode.To understand the dynamics, we propose PHIRVD, a mechanistic infection propagation model that Machine Learns (Bayesian Markov Chain Monte Carlo) the evolution of six infection stages, namely healthy susceptible (H), predisposed comorbid susceptible (P), infected (I), recovered (R), herd immunized (V) and mortality (D), providing a highly reliable mortality prediction profile for 18 countries at varying stages of lockdown. Training data between 10 February to 29 June 2020, PHIRVD can accurately predict mortality profile up to November 2020, including the second wave kinetics. The model also suggests mortality-to-infection ratio as a more dynamic pandemic descriptor, substituting reproduction number. PHIRVD establishes the importance of early and prolonged but strategic lockdown to contain future relapse, complementing futuristic vaccine impact. |
format | Online Article Text |
id | pubmed-8173017 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81730172021-06-04 Infection kinetics of Covid-19 and containment strategy Chattopadhyay, Amit K Choudhury, Debajyoti Ghosh, Goutam Kundu, Bidisha Nath, Sujit Kumar Sci Rep Article The devastating trail of Covid-19 is characterized by one of the highest mortality-to-infected ratio for a pandemic. Restricted therapeutic and early-stage vaccination still renders social exclusion through lockdown as the key containment mode.To understand the dynamics, we propose PHIRVD, a mechanistic infection propagation model that Machine Learns (Bayesian Markov Chain Monte Carlo) the evolution of six infection stages, namely healthy susceptible (H), predisposed comorbid susceptible (P), infected (I), recovered (R), herd immunized (V) and mortality (D), providing a highly reliable mortality prediction profile for 18 countries at varying stages of lockdown. Training data between 10 February to 29 June 2020, PHIRVD can accurately predict mortality profile up to November 2020, including the second wave kinetics. The model also suggests mortality-to-infection ratio as a more dynamic pandemic descriptor, substituting reproduction number. PHIRVD establishes the importance of early and prolonged but strategic lockdown to contain future relapse, complementing futuristic vaccine impact. Nature Publishing Group UK 2021-06-02 /pmc/articles/PMC8173017/ /pubmed/34078929 http://dx.doi.org/10.1038/s41598-021-90698-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Chattopadhyay, Amit K Choudhury, Debajyoti Ghosh, Goutam Kundu, Bidisha Nath, Sujit Kumar Infection kinetics of Covid-19 and containment strategy |
title | Infection kinetics of Covid-19 and containment strategy |
title_full | Infection kinetics of Covid-19 and containment strategy |
title_fullStr | Infection kinetics of Covid-19 and containment strategy |
title_full_unstemmed | Infection kinetics of Covid-19 and containment strategy |
title_short | Infection kinetics of Covid-19 and containment strategy |
title_sort | infection kinetics of covid-19 and containment strategy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8173017/ https://www.ncbi.nlm.nih.gov/pubmed/34078929 http://dx.doi.org/10.1038/s41598-021-90698-2 |
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