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Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening
Sugar Will Eventually be Exported Transporters (SWEETs), a type of sugar efflux transporters, have been extensively researched upon due to their role in phloem loading for distant sugar transport, fruit development, and stress regulation, etc. Several plant species are known to possess the SWEET gen...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8174149/ https://www.ncbi.nlm.nih.gov/pubmed/34131516 http://dx.doi.org/10.7717/peerj.11404 |
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author | Lin, Qihua Zhong, Qiuzhen Zhang, Zehuang |
author_facet | Lin, Qihua Zhong, Qiuzhen Zhang, Zehuang |
author_sort | Lin, Qihua |
collection | PubMed |
description | Sugar Will Eventually be Exported Transporters (SWEETs), a type of sugar efflux transporters, have been extensively researched upon due to their role in phloem loading for distant sugar transport, fruit development, and stress regulation, etc. Several plant species are known to possess the SWEET genes; however, little is known about their presence in Averrhoa Carambola L. (Oxalidaceae), an evergreen fruit crop (star fruit) in tropical and subtropical regions of Southeast Asia. In this study, we established an Averrhoa Carambola L. unigenes library from fruits of ‘XianMiyangtao’ (XM) by RNA sequencing (RNA-seq). A total of 99,319 unigenes, each longer than 200 bp with a total length was 72.00 Mb, were identified. A total of 51,642 unigenes (52.00%) were annotated. Additionally, 10 AcSWEET genes from the Averrhoa Carambola L. unigenes library were identified and classified, followed by a comprehensive analysis of their structures and conserved motif compositions, and evolutionary relationships. Moreover, the expression patterns of AcSWEETs in ‘XM’ cultivars during fruit ripening were confirmed using quantitative real-time PCR (qRT-PCR), combined with the soluble sugar and titratable acids content during ripening, showed that AcSWEET2a/2b and AcSWEET16b might participate in sugar transport during fruit ripening. This work presents a general profile of the AcSWEET gene family in Averrhoa Carambola L., which can be used to perform further studies on elucidating the functional roles of AcSWEET genes. |
format | Online Article Text |
id | pubmed-8174149 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81741492021-06-14 Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening Lin, Qihua Zhong, Qiuzhen Zhang, Zehuang PeerJ Agricultural Science Sugar Will Eventually be Exported Transporters (SWEETs), a type of sugar efflux transporters, have been extensively researched upon due to their role in phloem loading for distant sugar transport, fruit development, and stress regulation, etc. Several plant species are known to possess the SWEET genes; however, little is known about their presence in Averrhoa Carambola L. (Oxalidaceae), an evergreen fruit crop (star fruit) in tropical and subtropical regions of Southeast Asia. In this study, we established an Averrhoa Carambola L. unigenes library from fruits of ‘XianMiyangtao’ (XM) by RNA sequencing (RNA-seq). A total of 99,319 unigenes, each longer than 200 bp with a total length was 72.00 Mb, were identified. A total of 51,642 unigenes (52.00%) were annotated. Additionally, 10 AcSWEET genes from the Averrhoa Carambola L. unigenes library were identified and classified, followed by a comprehensive analysis of their structures and conserved motif compositions, and evolutionary relationships. Moreover, the expression patterns of AcSWEETs in ‘XM’ cultivars during fruit ripening were confirmed using quantitative real-time PCR (qRT-PCR), combined with the soluble sugar and titratable acids content during ripening, showed that AcSWEET2a/2b and AcSWEET16b might participate in sugar transport during fruit ripening. This work presents a general profile of the AcSWEET gene family in Averrhoa Carambola L., which can be used to perform further studies on elucidating the functional roles of AcSWEET genes. PeerJ Inc. 2021-05-31 /pmc/articles/PMC8174149/ /pubmed/34131516 http://dx.doi.org/10.7717/peerj.11404 Text en ©2021 Lin et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Agricultural Science Lin, Qihua Zhong, Qiuzhen Zhang, Zehuang Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening |
title | Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening |
title_full | Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening |
title_fullStr | Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening |
title_full_unstemmed | Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening |
title_short | Identification and functional analysis of SWEET gene family in Averrhoa carambola L. fruits during ripening |
title_sort | identification and functional analysis of sweet gene family in averrhoa carambola l. fruits during ripening |
topic | Agricultural Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8174149/ https://www.ncbi.nlm.nih.gov/pubmed/34131516 http://dx.doi.org/10.7717/peerj.11404 |
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