The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)

Trapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chlor...

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Detalles Bibliográficos
Autores principales: Wang, Wuchao, Fan, Xiangrong, Li, Xiuling, Chen, Yuanyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Rapid Communications
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8174476/
https://www.ncbi.nlm.nih.gov/pubmed/34124352
http://dx.doi.org/10.1080/23802359.2021.1930601
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author Wang, Wuchao
Fan, Xiangrong
Li, Xiuling
Chen, Yuanyuan
author_facet Wang, Wuchao
Fan, Xiangrong
Li, Xiuling
Chen, Yuanyuan
author_sort Wang, Wuchao
collection PubMed
description Trapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chloroplast genome size of T. incisa was 155, 453 bp, consisting of two inverted repeat (IR) regions (24, 388 bp), one large single copy (LSC) region (88, 398 bp) and one small single copy (SSC) region (18, 279 bp). A total of 129 genes were annotated, including 83 protein-coding genes, 38 tRNA genes and 8 rRNA genes. Among them, 19 genes were duplicated (6 protein-coding genes, 9 tRNA genes and 4 rRNA genes). The phylogenomic analysis suggested a close relationship between T. incisa and T. maximowiczii.
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spelling pubmed-81744762021-06-10 The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae) Wang, Wuchao Fan, Xiangrong Li, Xiuling Chen, Yuanyuan Mitochondrial DNA B Resour Rapid Communications Trapa L., an annual floating-leaved herb, is widely distributed in the old world and has important edible and medicinal values. However, the taxonomy and phylogeny of Trapa are unclear. Here, we reported the complete chloroplast genome of a wild species with small nuts, T. incisa. The complete chloroplast genome size of T. incisa was 155, 453 bp, consisting of two inverted repeat (IR) regions (24, 388 bp), one large single copy (LSC) region (88, 398 bp) and one small single copy (SSC) region (18, 279 bp). A total of 129 genes were annotated, including 83 protein-coding genes, 38 tRNA genes and 8 rRNA genes. Among them, 19 genes were duplicated (6 protein-coding genes, 9 tRNA genes and 4 rRNA genes). The phylogenomic analysis suggested a close relationship between T. incisa and T. maximowiczii. Taylor & Francis 2021-06-02 /pmc/articles/PMC8174476/ /pubmed/34124352 http://dx.doi.org/10.1080/23802359.2021.1930601 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rapid Communications
Wang, Wuchao
Fan, Xiangrong
Li, Xiuling
Chen, Yuanyuan
The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_full The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_fullStr The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_full_unstemmed The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_short The complete chloroplast genome sequence of Trapa incisa Sieb. & Zucc. (Lythraceae)
title_sort complete chloroplast genome sequence of trapa incisa sieb. & zucc. (lythraceae)
topic Rapid Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8174476/
https://www.ncbi.nlm.nih.gov/pubmed/34124352
http://dx.doi.org/10.1080/23802359.2021.1930601
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