Cargando…
Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process
Intracellular protein trafficking processes consisting of three intracellular states are described by three differential equations. To solve the equations, a quadratic equation is required, and its roots are generally real or complex. The purpose of the present study is to clarify the meanings of ro...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8176294/ https://www.ncbi.nlm.nih.gov/pubmed/34136098 http://dx.doi.org/10.1016/j.csbj.2021.04.053 |
_version_ | 1783703231573000192 |
---|---|
author | Marunaka, Yoshinori Yagi, Katsumi |
author_facet | Marunaka, Yoshinori Yagi, Katsumi |
author_sort | Marunaka, Yoshinori |
collection | PubMed |
description | Intracellular protein trafficking processes consisting of three intracellular states are described by three differential equations. To solve the equations, a quadratic equation is required, and its roots are generally real or complex. The purpose of the present study is to clarify the meanings of roots of real and complex numbers. To clarify the point, we define that: 1) ‘ [Formula: see text] ’ is the insertion rate from an insertion state trafficking to the plasma membrane state; 2) ‘ [Formula: see text] ’, the endocytotic rate from the plasma membrane state trafficking to a recycling state; 3) ‘ [Formula: see text] ’, the recycling rate from the recycling state trafficking to the insertion state. Amounts of proteins in three states are expressed as [Formula: see text] with [Formula: see text] = constant and [Formula: see text] and [Formula: see text] are roots of a quadratic equation, [Formula: see text]. When [Formula: see text] and [Formula: see text] are real [Formula: see text] , amounts of proteins in three states shows no oscillatory change but a monotonic change after a transient increase (or decrease); when [Formula: see text] and [Formula: see text] are complex [Formula: see text] , amounts of proteins in three states are expressed as [Formula: see text] ([Formula: see text] , [Formula: see text] , [Formula: see text] , [Formula: see text] = complex and [Formula: see text] [Formula: see text] = real: [Formula: see text] = conjugate each other; [Formula: see text] = conjugate each other), showing an oscillatory change with time. The frequency of oscillatory change appearance is evaluated to be 60% at random combinations of three trafficking rates, [Formula: see text] , [Formula: see text] and [Formula: see text]. The present study indicates that complex numbers have an essentially important meaning in appearance of oscillatory phenomena in bodily and cellular function. |
format | Online Article Text |
id | pubmed-8176294 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-81762942021-06-15 Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process Marunaka, Yoshinori Yagi, Katsumi Comput Struct Biotechnol J Research Article Intracellular protein trafficking processes consisting of three intracellular states are described by three differential equations. To solve the equations, a quadratic equation is required, and its roots are generally real or complex. The purpose of the present study is to clarify the meanings of roots of real and complex numbers. To clarify the point, we define that: 1) ‘ [Formula: see text] ’ is the insertion rate from an insertion state trafficking to the plasma membrane state; 2) ‘ [Formula: see text] ’, the endocytotic rate from the plasma membrane state trafficking to a recycling state; 3) ‘ [Formula: see text] ’, the recycling rate from the recycling state trafficking to the insertion state. Amounts of proteins in three states are expressed as [Formula: see text] with [Formula: see text] = constant and [Formula: see text] and [Formula: see text] are roots of a quadratic equation, [Formula: see text]. When [Formula: see text] and [Formula: see text] are real [Formula: see text] , amounts of proteins in three states shows no oscillatory change but a monotonic change after a transient increase (or decrease); when [Formula: see text] and [Formula: see text] are complex [Formula: see text] , amounts of proteins in three states are expressed as [Formula: see text] ([Formula: see text] , [Formula: see text] , [Formula: see text] , [Formula: see text] = complex and [Formula: see text] [Formula: see text] = real: [Formula: see text] = conjugate each other; [Formula: see text] = conjugate each other), showing an oscillatory change with time. The frequency of oscillatory change appearance is evaluated to be 60% at random combinations of three trafficking rates, [Formula: see text] , [Formula: see text] and [Formula: see text]. The present study indicates that complex numbers have an essentially important meaning in appearance of oscillatory phenomena in bodily and cellular function. Research Network of Computational and Structural Biotechnology 2021-04-25 /pmc/articles/PMC8176294/ /pubmed/34136098 http://dx.doi.org/10.1016/j.csbj.2021.04.053 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Marunaka, Yoshinori Yagi, Katsumi Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process |
title | Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process |
title_full | Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process |
title_fullStr | Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process |
title_full_unstemmed | Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process |
title_short | Essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process |
title_sort | essential requirement of complex number for oscillatory phenomenon in intracellular trafficking process |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8176294/ https://www.ncbi.nlm.nih.gov/pubmed/34136098 http://dx.doi.org/10.1016/j.csbj.2021.04.053 |
work_keys_str_mv | AT marunakayoshinori essentialrequirementofcomplexnumberforoscillatoryphenomenoninintracellulartraffickingprocess AT yagikatsumi essentialrequirementofcomplexnumberforoscillatoryphenomenoninintracellulartraffickingprocess |