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ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19

The goal of this research is to develop and implement a highly effective deep learning model for detecting COVID-19. To achieve this goal, in this paper, we propose an ensemble of Convolutional Neural Network (CNN) based on EfficientNet, named ECOVNet, to detect COVID-19 from chest X-rays. To make t...

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Autores principales: Chowdhury, Nihad Karim, Kabir, Muhammad Ashad, Rahman, Md. Muhtadir, Rezoana, Noortaz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8176542/
https://www.ncbi.nlm.nih.gov/pubmed/34141883
http://dx.doi.org/10.7717/peerj-cs.551
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author Chowdhury, Nihad Karim
Kabir, Muhammad Ashad
Rahman, Md. Muhtadir
Rezoana, Noortaz
author_facet Chowdhury, Nihad Karim
Kabir, Muhammad Ashad
Rahman, Md. Muhtadir
Rezoana, Noortaz
author_sort Chowdhury, Nihad Karim
collection PubMed
description The goal of this research is to develop and implement a highly effective deep learning model for detecting COVID-19. To achieve this goal, in this paper, we propose an ensemble of Convolutional Neural Network (CNN) based on EfficientNet, named ECOVNet, to detect COVID-19 from chest X-rays. To make the proposed model more robust, we have used one of the largest open-access chest X-ray data sets named COVIDx containing three classes—COVID-19, normal, and pneumonia. For feature extraction, we have applied an effective CNN structure, namely EfficientNet, with ImageNet pre-training weights. The generated features are transferred into custom fine-tuned top layers followed by a set of model snapshots. The predictions of the model snapshots (which are created during a single training) are consolidated through two ensemble strategies, i.e., hard ensemble and soft ensemble, to enhance classification performance. In addition, a visualization technique is incorporated to highlight areas that distinguish classes, thereby enhancing the understanding of primal components related to COVID-19. The results of our empirical evaluations show that the proposed ECOVNet model outperforms the state-of-the-art approaches and significantly improves detection performance with 100% recall for COVID-19 and overall accuracy of 96.07%. We believe that ECOVNet can enhance the detection of COVID-19 disease, and thus, underpin a fully automated and efficacious COVID-19 detection system.
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spelling pubmed-81765422021-06-16 ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19 Chowdhury, Nihad Karim Kabir, Muhammad Ashad Rahman, Md. Muhtadir Rezoana, Noortaz PeerJ Comput Sci Bioinformatics The goal of this research is to develop and implement a highly effective deep learning model for detecting COVID-19. To achieve this goal, in this paper, we propose an ensemble of Convolutional Neural Network (CNN) based on EfficientNet, named ECOVNet, to detect COVID-19 from chest X-rays. To make the proposed model more robust, we have used one of the largest open-access chest X-ray data sets named COVIDx containing three classes—COVID-19, normal, and pneumonia. For feature extraction, we have applied an effective CNN structure, namely EfficientNet, with ImageNet pre-training weights. The generated features are transferred into custom fine-tuned top layers followed by a set of model snapshots. The predictions of the model snapshots (which are created during a single training) are consolidated through two ensemble strategies, i.e., hard ensemble and soft ensemble, to enhance classification performance. In addition, a visualization technique is incorporated to highlight areas that distinguish classes, thereby enhancing the understanding of primal components related to COVID-19. The results of our empirical evaluations show that the proposed ECOVNet model outperforms the state-of-the-art approaches and significantly improves detection performance with 100% recall for COVID-19 and overall accuracy of 96.07%. We believe that ECOVNet can enhance the detection of COVID-19 disease, and thus, underpin a fully automated and efficacious COVID-19 detection system. PeerJ Inc. 2021-05-26 /pmc/articles/PMC8176542/ /pubmed/34141883 http://dx.doi.org/10.7717/peerj-cs.551 Text en © 2021 Chowdhury et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Computer Science) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Chowdhury, Nihad Karim
Kabir, Muhammad Ashad
Rahman, Md. Muhtadir
Rezoana, Noortaz
ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19
title ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19
title_full ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19
title_fullStr ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19
title_full_unstemmed ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19
title_short ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19
title_sort ecovnet: a highly effective ensemble based deep learning model for detecting covid-19
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8176542/
https://www.ncbi.nlm.nih.gov/pubmed/34141883
http://dx.doi.org/10.7717/peerj-cs.551
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