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Data mining of an acoustic biomarker in tongue cancers and its clinical validation

The promise of speech disorders as biomarkers in clinical examination has been identified in a broad spectrum of neurodegenerative diseases. However, to the best of our knowledge, a validated acoustic marker with established discriminative and evaluative properties has not yet been developed for ora...

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Autores principales: Xiao, Yudong, Wang, Tao, Deng, Wei, Yang, Le, Zeng, Bin, Lao, Xiaomei, Zhang, Sien, Liu, Xiangqi, Ouyang, Daiqiao, Liao, Guiqing, Liang, Yujie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8178493/
https://www.ncbi.nlm.nih.gov/pubmed/33938165
http://dx.doi.org/10.1002/cam4.3872
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author Xiao, Yudong
Wang, Tao
Deng, Wei
Yang, Le
Zeng, Bin
Lao, Xiaomei
Zhang, Sien
Liu, Xiangqi
Ouyang, Daiqiao
Liao, Guiqing
Liang, Yujie
author_facet Xiao, Yudong
Wang, Tao
Deng, Wei
Yang, Le
Zeng, Bin
Lao, Xiaomei
Zhang, Sien
Liu, Xiangqi
Ouyang, Daiqiao
Liao, Guiqing
Liang, Yujie
author_sort Xiao, Yudong
collection PubMed
description The promise of speech disorders as biomarkers in clinical examination has been identified in a broad spectrum of neurodegenerative diseases. However, to the best of our knowledge, a validated acoustic marker with established discriminative and evaluative properties has not yet been developed for oral tongue cancers. Here we cross‐sectionally collected a screening dataset that included acoustic parameters extracted from 3 sustained vowels /ɑ/, /i/, /u/ and binary perceptual outcomes from 12 consonant‐vowel syllables. We used a support vector machine with linear kernel function within this dataset to identify the formant centralization ratio (FCR) as a dominant predictor of different perceptual outcomes across gender and syllable. The Acoustic analysis, Perceptual evaluation and Quality of Life assessment (APeQoL) was used to validate the FCR in 33 patients with primary resectable oral tongue cancers. Measurements were taken before (pre‐op) and four to six weeks after (post‐op) surgery. The speech handicap index (SHI), a speech‐specific questionnaire, was also administrated at these time points. Pre‐op correlation analysis within the APeQoL revealed overall consistency and a strong correlation between FCR and SHI scores. FCRs also increased significantly with increasing T classification pre‐operatively, especially for women. Longitudinally, the main effects of T classification, the extent of resection, and their interaction effects with time (pre‐op vs. post‐op) on FCRs were all significant. For pre‐operative FCR, after merging the two datasets, a cut‐off value of 0.970 produced an AUC of 0.861 (95% confidence interval: 0.785–0.938) for T(3‐4) patients. In sum, this study determined that FCR is an acoustic marker with the potential to detect disease and related speech function in oral tongue cancers. These are preliminary findings that need to be replicated in longitudinal studies and/or larger cohorts.
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spelling pubmed-81784932021-06-15 Data mining of an acoustic biomarker in tongue cancers and its clinical validation Xiao, Yudong Wang, Tao Deng, Wei Yang, Le Zeng, Bin Lao, Xiaomei Zhang, Sien Liu, Xiangqi Ouyang, Daiqiao Liao, Guiqing Liang, Yujie Cancer Med Bioinfomatics The promise of speech disorders as biomarkers in clinical examination has been identified in a broad spectrum of neurodegenerative diseases. However, to the best of our knowledge, a validated acoustic marker with established discriminative and evaluative properties has not yet been developed for oral tongue cancers. Here we cross‐sectionally collected a screening dataset that included acoustic parameters extracted from 3 sustained vowels /ɑ/, /i/, /u/ and binary perceptual outcomes from 12 consonant‐vowel syllables. We used a support vector machine with linear kernel function within this dataset to identify the formant centralization ratio (FCR) as a dominant predictor of different perceptual outcomes across gender and syllable. The Acoustic analysis, Perceptual evaluation and Quality of Life assessment (APeQoL) was used to validate the FCR in 33 patients with primary resectable oral tongue cancers. Measurements were taken before (pre‐op) and four to six weeks after (post‐op) surgery. The speech handicap index (SHI), a speech‐specific questionnaire, was also administrated at these time points. Pre‐op correlation analysis within the APeQoL revealed overall consistency and a strong correlation between FCR and SHI scores. FCRs also increased significantly with increasing T classification pre‐operatively, especially for women. Longitudinally, the main effects of T classification, the extent of resection, and their interaction effects with time (pre‐op vs. post‐op) on FCRs were all significant. For pre‐operative FCR, after merging the two datasets, a cut‐off value of 0.970 produced an AUC of 0.861 (95% confidence interval: 0.785–0.938) for T(3‐4) patients. In sum, this study determined that FCR is an acoustic marker with the potential to detect disease and related speech function in oral tongue cancers. These are preliminary findings that need to be replicated in longitudinal studies and/or larger cohorts. John Wiley and Sons Inc. 2021-05-02 /pmc/articles/PMC8178493/ /pubmed/33938165 http://dx.doi.org/10.1002/cam4.3872 Text en © 2021 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Bioinfomatics
Xiao, Yudong
Wang, Tao
Deng, Wei
Yang, Le
Zeng, Bin
Lao, Xiaomei
Zhang, Sien
Liu, Xiangqi
Ouyang, Daiqiao
Liao, Guiqing
Liang, Yujie
Data mining of an acoustic biomarker in tongue cancers and its clinical validation
title Data mining of an acoustic biomarker in tongue cancers and its clinical validation
title_full Data mining of an acoustic biomarker in tongue cancers and its clinical validation
title_fullStr Data mining of an acoustic biomarker in tongue cancers and its clinical validation
title_full_unstemmed Data mining of an acoustic biomarker in tongue cancers and its clinical validation
title_short Data mining of an acoustic biomarker in tongue cancers and its clinical validation
title_sort data mining of an acoustic biomarker in tongue cancers and its clinical validation
topic Bioinfomatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8178493/
https://www.ncbi.nlm.nih.gov/pubmed/33938165
http://dx.doi.org/10.1002/cam4.3872
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