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Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays

Deep learning and computer vision revolutionized a new method to automate medical image diagnosis. However, to achieve reliable and state-of-the-art performance, vision-based models require high computing costs and robust datasets. Moreover, even with the conventional training methods, large vision-...

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Autor principal: Montalbo, Francis Jesmar P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8178958/
https://www.ncbi.nlm.nih.gov/pubmed/34109106
http://dx.doi.org/10.1016/j.mex.2021.101408
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author Montalbo, Francis Jesmar P.
author_facet Montalbo, Francis Jesmar P.
author_sort Montalbo, Francis Jesmar P.
collection PubMed
description Deep learning and computer vision revolutionized a new method to automate medical image diagnosis. However, to achieve reliable and state-of-the-art performance, vision-based models require high computing costs and robust datasets. Moreover, even with the conventional training methods, large vision-based models still involve lengthy epochs and costly disk consumptions that can entail difficulty during deployment due to the absence of high-end infrastructures. Therefore, this method modified the training approach on a vision-based model through layer truncation, partial layer freezing, and feature fusion. The proposed method was employed on a Densely Connected Convolutional Neural Network (CNN), the DenseNet model, to diagnose whether a Chest X-Ray (CXR) is well, has Pneumonia, or has COVID-19. From the results, the performance to parameter size ratio highlighted this method's effectiveness to train a DenseNet model with fewer parameters compared to traditionally trained state-of-the-art Deep CNN (DCNN) models, yet yield promising results. • This novel method significantly reduced the model's parameter size without sacrificing much of its classification performance. • The proposed method had better performance against some state-of-the-art Deep Convolutional Neural Network (DCNN) models that diagnosed samples of CXRs with COVID-19. • The proposed method delivered a conveniently scalable, reproducible, and deployable DCNN model for most low-end devices.
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spelling pubmed-81789582021-06-05 Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays Montalbo, Francis Jesmar P. MethodsX Method Article Deep learning and computer vision revolutionized a new method to automate medical image diagnosis. However, to achieve reliable and state-of-the-art performance, vision-based models require high computing costs and robust datasets. Moreover, even with the conventional training methods, large vision-based models still involve lengthy epochs and costly disk consumptions that can entail difficulty during deployment due to the absence of high-end infrastructures. Therefore, this method modified the training approach on a vision-based model through layer truncation, partial layer freezing, and feature fusion. The proposed method was employed on a Densely Connected Convolutional Neural Network (CNN), the DenseNet model, to diagnose whether a Chest X-Ray (CXR) is well, has Pneumonia, or has COVID-19. From the results, the performance to parameter size ratio highlighted this method's effectiveness to train a DenseNet model with fewer parameters compared to traditionally trained state-of-the-art Deep CNN (DCNN) models, yet yield promising results. • This novel method significantly reduced the model's parameter size without sacrificing much of its classification performance. • The proposed method had better performance against some state-of-the-art Deep Convolutional Neural Network (DCNN) models that diagnosed samples of CXRs with COVID-19. • The proposed method delivered a conveniently scalable, reproducible, and deployable DCNN model for most low-end devices. Elsevier 2021-06-05 /pmc/articles/PMC8178958/ /pubmed/34109106 http://dx.doi.org/10.1016/j.mex.2021.101408 Text en © 2021 The Author(s). Published by Elsevier B.V. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Method Article
Montalbo, Francis Jesmar P.
Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays
title Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays
title_full Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays
title_fullStr Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays
title_full_unstemmed Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays
title_short Truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing COVID-19 from chest X-rays
title_sort truncating a densely connected convolutional neural network with partial layer freezing and feature fusion for diagnosing covid-19 from chest x-rays
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8178958/
https://www.ncbi.nlm.nih.gov/pubmed/34109106
http://dx.doi.org/10.1016/j.mex.2021.101408
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