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Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines

This work describes the use of C–H⋯F–C contacts in the solid-state from the stator towards the rotator to fine-tune their internal motion, by constructing a set of interactions that generate close-fitting cavities in three supramolecular rotors 1–3I. The crystal structures of these rotors, determine...

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Autores principales: Navarro-Huerta, Armando, Jellen, Marcus J., Arcudia, Jessica, Teat, Simon J., Toscano, Rubén A., Merino, Gabriel, Rodríguez-Molina, Braulio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179257/
https://www.ncbi.nlm.nih.gov/pubmed/34163983
http://dx.doi.org/10.1039/d0sc05899h
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author Navarro-Huerta, Armando
Jellen, Marcus J.
Arcudia, Jessica
Teat, Simon J.
Toscano, Rubén A.
Merino, Gabriel
Rodríguez-Molina, Braulio
author_facet Navarro-Huerta, Armando
Jellen, Marcus J.
Arcudia, Jessica
Teat, Simon J.
Toscano, Rubén A.
Merino, Gabriel
Rodríguez-Molina, Braulio
author_sort Navarro-Huerta, Armando
collection PubMed
description This work describes the use of C–H⋯F–C contacts in the solid-state from the stator towards the rotator to fine-tune their internal motion, by constructing a set of interactions that generate close-fitting cavities in three supramolecular rotors 1–3I. The crystal structures of these rotors, determined by synchrotron radiation experiments at different temperatures, show the presence of such C–H⋯F–C contacts between extended carbazole stators featuring fluorinated phenyl rings and the 1,4-diazabicyclo[2.2.2]octane (DABCO) rotator. According to the (2)H NMR results, using deuterated samples, and periodic density functional theory computations, the rotators experience fast angular displacements (preferentially 120° jumps) due to their low rotational activation energies (E(a) = 0.8–2.0 kcal mol(−1)). The higher rotational barrier for 1 (2.0 kcal mol(−1)) is associated with a larger number of weak C–H⋯F–C contacts generated by the stators. This strategy offers the possibility to explore the correlation among weak intermolecular forces, cavity shape, and internal dynamics, which has strong implications in the design of future fine-tuned amphidynamic crystals.
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spelling pubmed-81792572021-06-22 Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines Navarro-Huerta, Armando Jellen, Marcus J. Arcudia, Jessica Teat, Simon J. Toscano, Rubén A. Merino, Gabriel Rodríguez-Molina, Braulio Chem Sci Chemistry This work describes the use of C–H⋯F–C contacts in the solid-state from the stator towards the rotator to fine-tune their internal motion, by constructing a set of interactions that generate close-fitting cavities in three supramolecular rotors 1–3I. The crystal structures of these rotors, determined by synchrotron radiation experiments at different temperatures, show the presence of such C–H⋯F–C contacts between extended carbazole stators featuring fluorinated phenyl rings and the 1,4-diazabicyclo[2.2.2]octane (DABCO) rotator. According to the (2)H NMR results, using deuterated samples, and periodic density functional theory computations, the rotators experience fast angular displacements (preferentially 120° jumps) due to their low rotational activation energies (E(a) = 0.8–2.0 kcal mol(−1)). The higher rotational barrier for 1 (2.0 kcal mol(−1)) is associated with a larger number of weak C–H⋯F–C contacts generated by the stators. This strategy offers the possibility to explore the correlation among weak intermolecular forces, cavity shape, and internal dynamics, which has strong implications in the design of future fine-tuned amphidynamic crystals. The Royal Society of Chemistry 2020-12-14 /pmc/articles/PMC8179257/ /pubmed/34163983 http://dx.doi.org/10.1039/d0sc05899h Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Navarro-Huerta, Armando
Jellen, Marcus J.
Arcudia, Jessica
Teat, Simon J.
Toscano, Rubén A.
Merino, Gabriel
Rodríguez-Molina, Braulio
Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines
title Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines
title_full Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines
title_fullStr Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines
title_full_unstemmed Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines
title_short Tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines
title_sort tailoring the cavities of hydrogen-bonded amphidynamic crystals using weak contacts: towards faster molecular machines
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179257/
https://www.ncbi.nlm.nih.gov/pubmed/34163983
http://dx.doi.org/10.1039/d0sc05899h
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