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Data-efficient machine learning for molecular crystal structure prediction
The combination of modern machine learning (ML) approaches with high-quality data from quantum mechanical (QM) calculations can yield models with an unrivalled accuracy/cost ratio. However, such methods are ultimately limited by the computational effort required to produce the reference data. In par...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179468/ https://www.ncbi.nlm.nih.gov/pubmed/34163719 http://dx.doi.org/10.1039/d0sc05765g |
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author | Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. |
author_facet | Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. |
author_sort | Wengert, Simon |
collection | PubMed |
description | The combination of modern machine learning (ML) approaches with high-quality data from quantum mechanical (QM) calculations can yield models with an unrivalled accuracy/cost ratio. However, such methods are ultimately limited by the computational effort required to produce the reference data. In particular, reference calculations for periodic systems with many atoms can become prohibitively expensive for higher levels of theory. This trade-off is critical in the context of organic crystal structure prediction (CSP). Here, a data-efficient ML approach would be highly desirable, since screening a huge space of possible polymorphs in a narrow energy range requires the assessment of a large number of trial structures with high accuracy. In this contribution, we present tailored Δ-ML models that allow screening a wide range of crystal candidates while adequately describing the subtle interplay between intermolecular interactions such as H-bonding and many-body dispersion effects. This is achieved by enhancing a physics-based description of long-range interactions at the density functional tight binding (DFTB) level—for which an efficient implementation is available—with a short-range ML model trained on high-quality first-principles reference data. The presented workflow is broadly applicable to different molecular materials, without the need for a single periodic calculation at the reference level of theory. We show that this even allows the use of wavefunction methods in CSP. |
format | Online Article Text |
id | pubmed-8179468 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-81794682021-06-22 Data-efficient machine learning for molecular crystal structure prediction Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. Chem Sci Chemistry The combination of modern machine learning (ML) approaches with high-quality data from quantum mechanical (QM) calculations can yield models with an unrivalled accuracy/cost ratio. However, such methods are ultimately limited by the computational effort required to produce the reference data. In particular, reference calculations for periodic systems with many atoms can become prohibitively expensive for higher levels of theory. This trade-off is critical in the context of organic crystal structure prediction (CSP). Here, a data-efficient ML approach would be highly desirable, since screening a huge space of possible polymorphs in a narrow energy range requires the assessment of a large number of trial structures with high accuracy. In this contribution, we present tailored Δ-ML models that allow screening a wide range of crystal candidates while adequately describing the subtle interplay between intermolecular interactions such as H-bonding and many-body dispersion effects. This is achieved by enhancing a physics-based description of long-range interactions at the density functional tight binding (DFTB) level—for which an efficient implementation is available—with a short-range ML model trained on high-quality first-principles reference data. The presented workflow is broadly applicable to different molecular materials, without the need for a single periodic calculation at the reference level of theory. We show that this even allows the use of wavefunction methods in CSP. The Royal Society of Chemistry 2021-02-11 /pmc/articles/PMC8179468/ /pubmed/34163719 http://dx.doi.org/10.1039/d0sc05765g Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Wengert, Simon Csányi, Gábor Reuter, Karsten Margraf, Johannes T. Data-efficient machine learning for molecular crystal structure prediction |
title | Data-efficient machine learning for molecular crystal structure prediction |
title_full | Data-efficient machine learning for molecular crystal structure prediction |
title_fullStr | Data-efficient machine learning for molecular crystal structure prediction |
title_full_unstemmed | Data-efficient machine learning for molecular crystal structure prediction |
title_short | Data-efficient machine learning for molecular crystal structure prediction |
title_sort | data-efficient machine learning for molecular crystal structure prediction |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8179468/ https://www.ncbi.nlm.nih.gov/pubmed/34163719 http://dx.doi.org/10.1039/d0sc05765g |
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